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SCN18_31_3_15_R1_B_scaffold_192_72

Organism: SCN18_31_3_15_R1_B_Nitrobacter_62_136

near complete RP 50 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: comp(71195..71731)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RIMM_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 171.0
  • Bit_score: 310
  • Evalue 6.00e-82
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 171.0
  • Bit_score: 310
  • Evalue 1.70e-82
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 171.0
  • Bit_score: 310
  • Evalue 8.40e-82

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGACGGCGCGCGTCTGCGTGGCCCGGATCGGCGCCGCGCACGGCCTGCGCGGCGAGGTGCGGCTGTGGACCTTCACCGAAGACCCGATGTCGGTGACGCGATACGGCCCGCTCTCGACAAAGGATGGCGCGCGGCAGCTTGAGGTCGCGCACGCGCGGACCGCCAGGGACCACCTCGTCGCAACGTTCACAGGCGTGACCACGCGCGAGGACGCCGAGCGGCTCAACGGCATCGAGCTCTACATCGCGCGCGACAGGCTGCCCGCGACGGACGAAGGCGAATACTATCACGCCGACCTGATCGGCCTCGCCGCGGTCGATGCGGCCGGCACGCCGCTCGGGACGGTGGCCGCCATCCATAACTTCGGCGCAGGCGACATCATCGAGATCGCGCCCGCACATGGGCCGACGTTGATGCTGCCGTTCACAGACGCCGTGGTGCCGGTCGTGGACCTCGCCGGCGGACGCGTGGTGATCGAGATGCCTGGCGAGATCGAGGGCGAGGAGCCGGATTTCGACCCTCCAGGCGTTCGATAG
PROTEIN sequence
Length: 179
MTARVCVARIGAAHGLRGEVRLWTFTEDPMSVTRYGPLSTKDGARQLEVAHARTARDHLVATFTGVTTREDAERLNGIELYIARDRLPATDEGEYYHADLIGLAAVDAAGTPLGTVAAIHNFGAGDIIEIAPAHGPTLMLPFTDAVVPVVDLAGGRVVIEMPGEIEGEEPDFDPPGVR*