ggKbase home page

SCN18_25_1_16_R2_B_scaffold_663_20

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(18882..19211)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 108.0
  • Bit_score: 180
  • Evalue 8.00e-43
RNA methyltransferase TrmH, group 1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMV4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 108.0
  • Bit_score: 180
  • Evalue 5.70e-43
RNA methyl transferase TrmH similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 108.0
  • Bit_score: 180
  • Evalue 1.60e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
CTGGCGCGGCTGCTCCGCCGCAATCCGACCGACGCCGAGCGCATCCTGTGGCAGGCGCTGACCCGCGACCGCCGCTTCGCCGGCCTGTTCAAGCGGCAGACGCCGGTGGGGCGGCACATTCCGGATTTCGTGTCGTTCACCCGGCGCGTTGCGATCGAACTGGTGAACCCGAACGAGAGCGACACCATCGCGACGGATCGCGCCGCGCGATCCGCGTGGCTCGCCGAGCGCGGCTATCGCGTGGTGGAGATCGAGGCGGTGAAGGTGGAAGCGGATCTGGCGGGGGTGCTGGGGGAGTTGGCGATGAGGATGGGGGATGGGAAGCTGTAG
PROTEIN sequence
Length: 110
LARLLRRNPTDAERILWQALTRDRRFAGLFKRQTPVGRHIPDFVSFTRRVAIELVNPNESDTIATDRAARSAWLAERGYRVVEIEAVKVEADLAGVLGELAMRMGDGKL*