ggKbase home page

SCN18_10_11_15_R4_B_scaffold_157_28

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(28449..29333)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UGP0_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 289.0
  • Bit_score: 243
  • Evalue 1.50e-61
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 289.0
  • Bit_score: 243
  • Evalue 4.20e-62
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABR62820.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 289.0
  • Bit_score: 243
  • Evalue 2.10e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGCCAACGTCACCTTGAAGCAGCTCAGGACGTTCGTGGCGGTGGCCGAATGCGGCCGCTTCCGGCTGGCGGCGGAGGCCGTCAACCTCACCCAGTCGGCCGTGAGCATCCTCATCAAGGAGCTGGAAGGCCAGCTCGGCGCCAGCCTGTTCGACCGGCATACGCGTTTCGTCGGGCTGACCGACGCCGGCAAGCGGCTGCTGCCGCTCGCGGTAGATATCCTCGACCGGGTCGACAGCGCCGTCGATTCGATGGTCGACATCACCACGCTCAAGACGGGCCGCGTCACGATAGCCTCGGCGACCGTCATCGCCGCCACCTACCTGCCGAGCCGCATCGCCAGCTTCATGCGCAGATATCCGGAGATCCGCGTCGACCTGCGCGACGTCTCGGAAGACGAGATCCGCGCGCTGCTGCTCGACGGGGAGGCCGACATCGGCGTCGGCACCAGCCGGTTCCGCGAGCAGGAAATCAACGAGCACGAGCTGTTCGCGGATCATCTCGCGCTCTTCTGCCCCGCCGACGACCCGCTGGCCGCGAAGAAGCGGGTCGGCTGGGCCGATTTCGACAACCGGACCTTCATCGCGCTGACCCCGGAGAACCCGCTGCAGCGCAGGATCGACGAGCTGCTGGAGGTCAACGGTGTGACGACCCGCCGCCAGTTCAGCGTGCGCTTCTCGGCGACCCTGCTGGCGCTGGTCAACGAGGGGCTGGGCATCGGCATCCTGCCGGCCGGCTCGAAGGGCCTGTCGCCGATGGTCAACATCGTGATGCGGCCGATCAGGGACCAGGTGGCCTCGCGCAACGTCGTGGCGCTGACTCTGCGGGAACGCACGCTCAGCCCCGCTGCCCGCAGCTTCTTCCAGCATCTCACGAACGGATAG
PROTEIN sequence
Length: 295
MANVTLKQLRTFVAVAECGRFRLAAEAVNLTQSAVSILIKELEGQLGASLFDRHTRFVGLTDAGKRLLPLAVDILDRVDSAVDSMVDITTLKTGRVTIASATVIAATYLPSRIASFMRRYPEIRVDLRDVSEDEIRALLLDGEADIGVGTSRFREQEINEHELFADHLALFCPADDPLAAKKRVGWADFDNRTFIALTPENPLQRRIDELLEVNGVTTRRQFSVRFSATLLALVNEGLGIGILPAGSKGLSPMVNIVMRPIRDQVASRNVVALTLRERTLSPAARSFFQHLTNG*