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SCN18_10_11_15_R4_B_scaffold_717_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(197..1171)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 294.0
  • Bit_score: 283
  • Evalue 4.00e-74
LysR family transcriptional regulator {ECO:0000313|EMBL:AJE46723.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 294.0
  • Bit_score: 283
  • Evalue 2.00e-73
LysR family transcriptional regulator id=4840595 bin=GWC2_Methylomirabilis_70_16 species=Halomonas sp. KM-1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 300.0
  • Bit_score: 209
  • Evalue 2.60e-51

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGTCGAAGAATCTGAAAGTTCGCCAGGTCGAGGCATTCAGGGCAGTCATGCAACTCGGCAGCATGACCCTGGCCTCCGATCAGCTCGGCGTGTCGCAACCCGCGATAAGCCGCCTCATCTCAGATTTTCAGGAGGCCGTCGGCTACAAGTTGTTTACGCGCAGGCGCCACGGCATCCTGCCGACCGAGGATGCCTGGCGGCTCTACCAGGAAGTGGAAAGCGTCTTCACCGGCCTCGACGAGCTCAGCCGCCGCGCCGCCGCGATCAAGAATCTGGAGATCGGCCACATCAGCGTGTCGGCCGTCAGCGTCACCGGCAACAACCTGCTTCCCCTGGTGATCGCCGACTTCGTCAAGAAATACGAAGGCGTGAACATCAGGCTCGACATATGCCGCCACGACAGGGTGCTGGAGGCGCTGTTTGCCCGCCGCTCCGACCTCGGCCTGATCTCGGGCAGCGACTTCACCGGTGATCTGTCGCGCACCATCCTGTCCACCCGCCCCGCCGTCTGCATCATGCCGCAGGGCCACTTCCTCGCCGACCGGCCGGTGATCCGGGCCGAGGATCTCGCCGGCCTGCCCTTCATCAGCTTCCCGCACGATGCGAGCTACCGCTACCGGACTGATAGCCTGTTCGAGCGCGCGGGCGTCGAGCGCGACCTGCGGCTCGAGGGCGGCACGCATGAATCGGTCTGCAACCTGGTCGCGGCCGGCCTCGGCGTGTCGATCATCAGCCCGTTCACGGCGGCACTGCGCTCGCGCCTGCCGGTGGTGGCGCGCCCCTTCCTGCCGGCGCTCAACCTGCAGATCGGGATCCTCTGGGACGACGCGCGCCTGTCCTCTGCCGCGCGGCTGTTCCGCGACTTCGTCGTCGAATGGTTCAAGGCCAATGACGACGCGATCTCGACGCTCAACCCGCATTCCCAATTGGCCTCGGCAGCCATCGGCCTGCGCAGGCAGGCGAGCGCATCCTGA
PROTEIN sequence
Length: 325
MSKNLKVRQVEAFRAVMQLGSMTLASDQLGVSQPAISRLISDFQEAVGYKLFTRRRHGILPTEDAWRLYQEVESVFTGLDELSRRAAAIKNLEIGHISVSAVSVTGNNLLPLVIADFVKKYEGVNIRLDICRHDRVLEALFARRSDLGLISGSDFTGDLSRTILSTRPAVCIMPQGHFLADRPVIRAEDLAGLPFISFPHDASYRYRTDSLFERAGVERDLRLEGGTHESVCNLVAAGLGVSIISPFTAALRSRLPVVARPFLPALNLQIGILWDDARLSSAARLFRDFVVEWFKANDDAISTLNPHSQLASAAIGLRRQASAS*