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SCN18_10_11_15_R4_B_scaffold_709_26

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(20199..21068)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS40_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 272.0
  • Bit_score: 481
  • Evalue 4.20e-133
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 289.0
  • Bit_score: 493
  • Evalue 1.50e-136
tRNA(cytosine32)-2-thiocytidine synthetase similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 279.0
  • Bit_score: 468
  • Evalue 7.90e-130

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGAACGTTCCTGTTTCCATCGAAATGGAAGACGCCGGCGCCTGCCACCCGATGTTCCGGGCGGTGCCGTCGTCGGTCGAGTTCAACAAGCTGCGCAAGCGGCTGCTCAGACAGGCGCGCGAGGCGATCGAGACATACGGCATGGCGCGGCCGGGCGAGCGCTGGCTGGTGGCGCTGTCGGGCGGCAAGGACAGCTACGGACTGCTGGCGCTGCTGCTCGACCTCAAATGGCGCGGCGTGCTGCCGGTCGACCTGCTCGCCTGCAACCTCGACCAGGGCCAGCCCAACTTCCCCAAGCACGTCCTGCCGGAGTTCCTGACCGCGAACGGCGTGCCGCACCGCATCGAGTACCGCGACACCTATTCGGTGGTCACCGACAGGATCGCGGAAGGCAACACCTATTGCTCGCTGTGCTCGCGCCTGCGGCGCGGCCATCTCTACCGTATCGCGCGCGAGGAGGGCTGTGCGGCGCTGGTGCTCGGCCACCATCGCGAGGACATCCTCGAGACCTTCTTCATGAACCTGTTCCACGGCGGGCGGCTGGCGGCGATGCCGCCGAAACTCGTCAACGACGAGGGCGACGTCACCGTGCTGCGGCCGCTGTCGCTGTGCGCCGAGGCCGATCTCGCCCGCTTCGCCGAGGCGATGGCCTTCCCGATCATCCCCTGCGACCTGTGCGGCAGCCAGGATGGACTTCAGCGCAACGCCATGAAGGCGATGCTCGACGACATCGAGCGGAAGATGCCGGGCCGCAAGGACACGATGATCCGCGCGCTCGCCAACGTGAGGCCTTCGCACCTGCTCGACACCGGCCTGTTCGACTTCGCGGGGCTGGCCGCCGCCGCGACCGTGCCGGTCGCGGCGGAATAG
PROTEIN sequence
Length: 290
MNVPVSIEMEDAGACHPMFRAVPSSVEFNKLRKRLLRQAREAIETYGMARPGERWLVALSGGKDSYGLLALLLDLKWRGVLPVDLLACNLDQGQPNFPKHVLPEFLTANGVPHRIEYRDTYSVVTDRIAEGNTYCSLCSRLRRGHLYRIAREEGCAALVLGHHREDILETFFMNLFHGGRLAAMPPKLVNDEGDVTVLRPLSLCAEADLARFAEAMAFPIIPCDLCGSQDGLQRNAMKAMLDDIERKMPGRKDTMIRALANVRPSHLLDTGLFDFAGLAAAATVPVAAE*