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SCN18_10_11_15_R4_B_scaffold_803_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(510..1253)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with HTH domain n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KU97_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 245.0
  • Bit_score: 295
  • Evalue 3.60e-77
LuxR family transcriptional regulator {ECO:0000313|EMBL:CDX33883.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 240.0
  • Bit_score: 305
  • Evalue 4.90e-80
DNA-binding protein with HTH domain similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 245.0
  • Bit_score: 295
  • Evalue 1.00e-77

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGGCAGTAACCGTGGCGAATTTCGACGACACGCTAGCCTACATAGACAGCATCCAGAAAGCGCGCACCCCCGACGAAATCTGCCGGACGCTGATCGACGTCACCAGCCGGTTTGGCATGACGGCCCTGCTGGCCGGAACCGTGCCCAAGCCGGGCTCGCCCCGGGACGAGCTGCGCTCGCACGTCATGCTCTGCGACTGGCCCTCGGGCTGGCTGGAGCGCTACATCGCGATGAACCATATCGAGCACGACCCACTCGTGGCGTTCATGAAGCGCAACCTCTCGGCCGTCTACTGGCACGACGCGATCGAGCGCGCCGGCGCCGACCGGGCGGCACGCCGCGTCTGCGCCGAGGCCAGCGCTTTCAGGCTCAATGACGGCTTCGCGGTGCCGGTGGTCACGGTCGAGGGCGAGGTCGTCATCGTGTCGTTCGGCGGCGAGGAGATCGACCTGTCGCAGCAGACGGTCGGCGTCGTCTCGCTGGTCTCCACCTTCGCGATCGGCCGCGCCATGCAGCTTTCGGCCGCGCGCGAGGCGGTCGAGCCGCGGCCCGAGCTGACCGACCGCGAGAAGGAATGCATGCGCTGGGCCGCGCTCGGCAAGTCGGAATGGGAGATCTCGCAGATCCTCGGCATTTCCGAGCATACGTCGGAAAAACATCTGCTCAACGCCAAGAGCAAGCTGCGCGCGGCCAACCGCGTCCAGGCCGTGGCGGAGGCCATCCGGCAGGGCTATATCAGCTAG
PROTEIN sequence
Length: 248
MAVTVANFDDTLAYIDSIQKARTPDEICRTLIDVTSRFGMTALLAGTVPKPGSPRDELRSHVMLCDWPSGWLERYIAMNHIEHDPLVAFMKRNLSAVYWHDAIERAGADRAARRVCAEASAFRLNDGFAVPVVTVEGEVVIVSFGGEEIDLSQQTVGVVSLVSTFAIGRAMQLSAAREAVEPRPELTDREKECMRWAALGKSEWEISQILGISEHTSEKHLLNAKSKLRAANRVQAVAEAIRQGYIS*