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SCN18_14_9_16_R4_B_Actinobacteria_68_6

In projects: SCN18_14_9_16_R4_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Description

Extracted from CN18_14_9_16_R4_B_concoct_035

Displaying items 51-100 of 844 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_14_9_16_R4_B_scaffold_16465
Species: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 (50%)
2 1019 bp 71.34 6.77 100.10
SCN18_14_9_16_R4_B_scaffold_7784
Genus: Microbacterium (66.67%)
3 2113 bp 66.07 8.23 100.10
SCN18_14_9_16_R4_B_scaffold_7765
Species: CN-SCN_Microbacterium_27x (50%)
2 2119 bp 69.14 7.15 100.09
SCN18_14_9_16_R4_B_scaffold_14064
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (100%)
2 1184 bp 66.98 5.07 100.08
SCN18_14_9_16_R4_B_scaffold_5791
Class: Actinobacteria (100%)
3 2890 bp 71.35 6.33 100.07
SCN18_14_9_16_R4_B_scaffold_9788
Species: SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 (50%)
2 1676 bp 70.05 6.44 100.06
SCN18_14_9_16_R4_B_scaffold_9593
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (50%)
2 1712 bp 69.45 6.48 100.06
SCN18_14_9_16_R4_B_scaffold_9481
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (50%)
2 1733 bp 62.72 6.92 100.06
SCN18_14_9_16_R4_B_scaffold_9297
Species: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial (50%)
2 1769 bp 69.30 5.51 100.06
SCN18_14_9_16_R4_B_scaffold_5005
Species: CN-SCN_Leifsonia_139x (100%)
2 3422 bp 71.24 7.41 100.03
SCN18_14_9_16_R4_B_scaffold_16504
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (50%)
2 1017 bp 69.12 5.60 100.00
SCN18_14_9_16_R4_B_scaffold_16254
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 1032 bp 69.38 4.94 100.00
SCN18_14_9_16_R4_B_scaffold_4307
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 4062 bp 67.13 6.50 100.00
SCN18_14_9_16_R4_B_scaffold_15207
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (100%)
1 1101 bp 67.76 5.45 100.00
SCN18_14_9_16_R4_B_scaffold_12048
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1377 bp 72.48 5.77 100.00
SCN18_14_9_16_R4_B_scaffold_8100
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 2037 bp 66.81 4.27 100.00
SCN18_14_9_16_R4_B_scaffold_14990
Species: CN-SCN_Microbacterium_18x (100%)
1 1116 bp 72.31 6.18 100.00
SCN18_14_9_16_R4_B_scaffold_8650
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 1899 bp 67.04 8.53 100.00
SCN18_14_9_16_R4_B_scaffold_10802
Species: CN-SCN_Microbacterium_18x (100%)
2 1524 bp 66.54 4.72 100.00
SCN18_14_9_16_R4_B_scaffold_8935
Species: CN-SCN_Leifsonia_139x (100%)
1 1839 bp 68.03 5.71 100.00
SCN18_14_9_16_R4_B_scaffold_9623
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 1707 bp 72.11 7.29 100.00
SCN18_14_9_16_R4_B_scaffold_14100
Species: SCNpilot_P_inoc_Microbacterium_67_17 (100%)
1 1182 bp 69.29 5.71 100.00
SCN18_14_9_16_R4_B_scaffold_16710
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (50%)
2 1005 bp 72.54 6.12 100.00
SCN18_14_9_16_R4_B_scaffold_14633
Species: SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial (100%)
1 1143 bp 65.35 5.25 100.00
SCN18_14_9_16_R4_B_scaffold_11720
Species: CN-SCN_Leifsonia_139x (50%)
2 1416 bp 69.92 5.83 100.00
SCN18_14_9_16_R4_B_scaffold_6729
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 2464 bp 66.64 6.76 99.96
SCN18_14_9_16_R4_B_scaffold_8792
Species: SCNpilot_P_inoc_Microbacterium_67_17 (100%)
1 1867 bp 70.59 6.43 99.95
SCN18_14_9_16_R4_B_scaffold_4908
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 3494 bp 69.09 5.88 99.94
SCN18_14_9_16_R4_B_scaffold_10083
Species: CN-SCN_Microbacterium_27x (100%)
1 1627 bp 70.13 5.99 99.94
SCN18_14_9_16_R4_B_scaffold_10357
Species: CN-SCN_Microbacterium_27x (100%)
1 1582 bp 69.72 6.07 99.94
SCN18_14_9_16_R4_B_scaffold_10435
Species: CN-SCN_Leifsonia_139x (50%)
2 1573 bp 67.90 7.53 99.94
SCN18_14_9_16_R4_B_scaffold_10436
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (50%)
2 1573 bp 64.34 4.86 99.94
SCN18_14_9_16_R4_B_scaffold_10459
Species: CN-SCN_Microbacterium_200x (50%)
2 1570 bp 67.77 5.83 99.94
SCN18_14_9_16_R4_B_scaffold_10817
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (100%)
1 1522 bp 66.95 5.81 99.93
SCN18_14_9_16_R4_B_scaffold_11090
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1486 bp 67.03 5.05 99.93
SCN18_14_9_16_R4_B_scaffold_5754
Species: CN-SCN_Microbacterium_37x (100%)
1 2912 bp 70.54 6.23 99.93
SCN18_14_9_16_R4_B_scaffold_13451
Species: Frankia sp. EAN1pec (50%)
2 1237 bp 57.80 3.76 99.92
SCN18_14_9_16_R4_B_scaffold_13701
Species: CN-SCN_Leifsonia_139x (100%)
1 1216 bp 72.62 4.44 99.92
SCN18_14_9_16_R4_B_scaffold_14774
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 1132 bp 65.19 7.02 99.91
SCN18_14_9_16_R4_B_scaffold_15061
Species: CN-SCN_Leifsonia_139x (100%)
1 1111 bp 68.14 8.91 99.91
SCN18_14_9_16_R4_B_scaffold_15236
Species: CN-SCN_Leifsonia_139x (100%)
1 1099 bp 71.06 5.73 99.91
SCN18_14_9_16_R4_B_scaffold_15283
Species: BJP_08E140C01_Actinomycetales_67_18 (100%)
1 1096 bp 70.26 5.20 99.91
SCN18_14_9_16_R4_B_scaffold_7571
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 2174 bp 70.88 7.52 99.91
SCN18_14_9_16_R4_B_scaffold_8020
Species: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 (100%)
1 2054 bp 71.81 6.43 99.90
SCN18_14_9_16_R4_B_scaffold_16767
Species: CN-SCN_Leifsonia_139x (100%)
2 1003 bp 72.08 7.63 99.90
SCN18_14_9_16_R4_B_scaffold_8303
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (100%)
1 1988 bp 71.28 6.41 99.90
SCN18_14_9_16_R4_B_scaffold_5976
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (100%)
1 2796 bp 65.34 6.60 99.89
SCN18_14_9_16_R4_B_scaffold_9662
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1700 bp 70.88 6.97 99.88
SCN18_14_9_16_R4_B_scaffold_9666
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (50%)
2 1700 bp 69.18 7.06 99.88
SCN18_14_9_16_R4_B_scaffold_6700
Species: CN-SCN_Leifsonia_139x (100%)
1 2475 bp 67.96 6.91 99.88
Displaying items 51-100 of 844 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.