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SCN18_30_10_14_R2_B_scaffold_10504_7

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 3845..4423

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase (EC:6.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 173.0
  • Bit_score: 106
  • Evalue 5.20e-21
2''''-5'''' RNA ligase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034CD497 similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 194.0
  • Bit_score: 110
  • Evalue 1.30e-21
2'-5' RNA ligase {ECO:0000313|EMBL:ETR74852.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 189.0
  • Bit_score: 121
  • Evalue 7.80e-25

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGGCCGGGCAGCTTTCGTTGGCCTTCGAAGCGGCAACCGTGCGGGTTCCAGTCTATTTCGCACTCAGGCCGGCTCTTGTTGCCGTGCCTGCCATTACGGAATGTGCGGAATGGTGCCGCCGGTCATACGGACTTTCGGAACCTGTATATGGCCCTCATCGATTGCATATTTCGCTGAATGCTGTGACGTCGCCTCGTGGTCCCCGAAAGGGCGATCTTGAAGCGGCGTTGCGCGCAGCAGAACACATAAGGTTTTCGCCTTTTCCAGTGGCCTTCGGTCGTCTCCGTACTTTCCGGGTTCGCCGCGACAAACAACCGACGGTACTCTGCTGTTGCGCTGGCATGGGGGAGTTGACGGCGCTTCGCAACGCCTTGCGTCAGGCATTGACGAGGGAAGGGCTTTGGCGCGGCCCGGCCGGCTTCGAGCCGCATGTCACGCTGATATGGGACCGACGAAGCGTTCCGCCGTCGCAGCTCGATGAACCGATCGGTTGGATGGCCGAGGATTTCGTCCTTCTGCGCACCATTGTGGGCGAGAGCCGGCAGGTGGAAATCGGACGCTGGCCGTTCCGCGCATAG
PROTEIN sequence
Length: 193
VAGQLSLAFEAATVRVPVYFALRPALVAVPAITECAEWCRRSYGLSEPVYGPHRLHISLNAVTSPRGPRKGDLEAALRAAEHIRFSPFPVAFGRLRTFRVRRDKQPTVLCCCAGMGELTALRNALRQALTREGLWRGPAGFEPHVTLIWDRRSVPPSQLDEPIGWMAEDFVLLRTIVGESRQVEIGRWPFRA*