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SCN18_30_10_14_R2_B_scaffold_15318_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1544..2050)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system lysozyme-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERG6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 164.0
  • Bit_score: 143
  • Evalue 1.20e-31
Type VI secretion system lysozyme-like protein {ECO:0000313|EMBL:EYR83976.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 164.0
  • Bit_score: 143
  • Evalue 1.70e-31
type VI secretion system lysozyme-like protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 155.0
  • Bit_score: 116
  • Evalue 4.40e-24

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGGCCCCGCTGGACAGAAAATCTGCGAAAAGACCCGTCATCCTGCCCATCCTCGACAGGCTCCTGCAAGGCGACAATATCGAGATCGACGGCAATTTCGACCGCGCCATCCAGGTCCTGCGGGAATCCATTCGCCGCGATCTCGAGATCCTTTTCAACACCCGGACCTATTACAAAGAAATCCCCGACGAACTCGGGGAGTTGAAGTCTTCGCTTGTCGCCTTCGGATTGCCCGATCTCCAGGTTGAAAATCTGGCCGGCGCCTCGCAGCAGGAGGAATGCCGGAGCCGTATCGAGGACGCGATACGGCGGTTCGAGCCCCGCCTGCGCGACGTTTCGGTGGAGATACTGCAAGATGATGCGAAGACGCACGACCGGACCCTTCGCTTCAGGATCGACGCTGTCATGGATATCGCCGAGACGGCTGAAACTGTCGTCTACGATACCTTTGTCGATCCGGTTTCCGGCGGCGTGTTGTTCTCCGGAACGAATTCCGCGGCTTCGTAG
PROTEIN sequence
Length: 169
MAPLDRKSAKRPVILPILDRLLQGDNIEIDGNFDRAIQVLRESIRRDLEILFNTRTYYKEIPDELGELKSSLVAFGLPDLQVENLAGASQQEECRSRIEDAIRRFEPRLRDVSVEILQDDAKTHDRTLRFRIDAVMDIAETAETVVYDTFVDPVSGGVLFSGTNSAAS*