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2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6
In projects: 2019_SCN_bioreactor_t3_planktonic  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Planctomycetales  →  Planctomycetia  →  Planctomycetes  →  Bacteria

Metagenomic Context

Parent: 2019_SCN_bioreactor_t3_planktonic_UNK

Properties

Avg. coverage: 6.13 Longest contig: 30.70 Kbp Bin length: 5.23 Mbp GC content: 54.48 %
Contigs count: 1189 Features count: 4827 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Displaying items 651-700 of 1189 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
2019_SCN_bioreactor_t3_planktonic_scaffold_42199
Species: Gimesia maris (50%)
2 1054 bp 52.94 3.70 88.52
2019_SCN_bioreactor_t3_planktonic_scaffold_116184
Class: Planctomycetia (66.67%)
3 2297 bp 55.07 6.01 88.55
2019_SCN_bioreactor_t3_planktonic_scaffold_76535
Species: Planctopirus limnophila (100%)
1 2255 bp 51.57 4.32 88.60
2019_SCN_bioreactor_t3_planktonic_scaffold_98081
Order: Planctomycetales (71.43%)
14 13881 bp 54.95 6.52 88.61
2019_SCN_bioreactor_t3_planktonic_scaffold_123945
Order: Planctomycetales (71.43%)
7 6171 bp 55.42 6.61 88.62
2019_SCN_bioreactor_t3_planktonic_scaffold_112823
Species: Gimesia maris (50%)
2 1804 bp 53.88 6.49 88.64
2019_SCN_bioreactor_t3_planktonic_scaffold_72758
Species: Planctopirus limnophila (100%)
1 1705 bp 54.72 5.63 88.68
2019_SCN_bioreactor_t3_planktonic_scaffold_15897
Species: Planctopirus limnophila (50%)
2 3271 bp 53.47 6.33 88.69
2019_SCN_bioreactor_t3_planktonic_scaffold_49748
Phylum: Planctomycetes (60%)
5 7553 bp 53.49 5.28 88.69
2019_SCN_bioreactor_t3_planktonic_scaffold_34805
Species: Planctopirus limnophila (50%)
2 1870 bp 55.45 4.89 88.72
2019_SCN_bioreactor_t3_planktonic_scaffold_64580
Species: Pirellula staleyi (75%)
4 2549 bp 53.32 5.71 88.74
2019_SCN_bioreactor_t3_planktonic_scaffold_100263
Order: Planctomycetales (50%)
8 6764 bp 55.47 6.05 88.79
2019_SCN_bioreactor_t3_planktonic_scaffold_111762
Order: Planctomycetales (81.82%)
11 14749 bp 54.23 6.15 88.83
2019_SCN_bioreactor_t3_planktonic_scaffold_69138
Order: Planctomycetales (75%)
8 11395 bp 56.18 5.92 88.83
2019_SCN_bioreactor_t3_planktonic_scaffold_30279
Species: Planctopirus limnophila (50%)
8 12300 bp 55.59 6.83 88.85
2019_SCN_bioreactor_t3_planktonic_scaffold_89758
Order: Planctomycetales (65%)
20 21743 bp 54.60 6.45 88.93
2019_SCN_bioreactor_t3_planktonic_scaffold_112949
Species: Blastopirellula marina (50%)
2 1292 bp 56.19 5.22 88.93
2019_SCN_bioreactor_t3_planktonic_scaffold_11800
Order: Planctomycetales (50%)
6 7628 bp 55.69 5.31 88.96
2019_SCN_bioreactor_t3_planktonic_scaffold_107142
Species: Planctopirus limnophila (50%)
2 1766 bp 55.55 6.80 89.01
2019_SCN_bioreactor_t3_planktonic_scaffold_15826
Species: Planctopirus limnophila (63.64%)
11 11300 bp 54.68 6.54 89.02
2019_SCN_bioreactor_t3_planktonic_scaffold_105445
Species: Gimesia maris (50%)
4 3779 bp 54.51 5.56 89.07
2019_SCN_bioreactor_t3_planktonic_scaffold_134642
Order: Planctomycetales (66.67%)
3 2068 bp 56.38 5.22 89.07
2019_SCN_bioreactor_t3_planktonic_scaffold_101635
Order: Planctomycetales (80%)
5 5786 bp 54.67 7.00 89.08
2019_SCN_bioreactor_t3_planktonic_scaffold_80456
Order: Planctomycetales (54.55%)
11 12726 bp 53.33 6.45 89.09
2019_SCN_bioreactor_t3_planktonic_scaffold_51573
Species: Singulisphaera acidiphila (50%)
2 1636 bp 54.58 5.59 89.12
2019_SCN_bioreactor_t3_planktonic_scaffold_123209
Class: Planctomycetia (66.67%)
3 2679 bp 53.98 5.32 89.14
2019_SCN_bioreactor_t3_planktonic_scaffold_59100
Order: Planctomycetales (61.54%)
13 13567 bp 54.91 5.90 89.16
2019_SCN_bioreactor_t3_planktonic_scaffold_25868
Species: Planctopirus limnophila (57.14%)
7 7520 bp 53.87 6.12 89.16
2019_SCN_bioreactor_t3_planktonic_scaffold_1450
Order: Planctomycetales (55.56%)
9 12375 bp 55.77 6.62 89.21
2019_SCN_bioreactor_t3_planktonic_scaffold_3803
Species: Gimesia maris (50%)
4 4620 bp 56.84 5.36 89.22
2019_SCN_bioreactor_t3_planktonic_scaffold_79132
Order: Planctomycetales (66.67%)
3 3993 bp 55.72 6.27 89.26
2019_SCN_bioreactor_t3_planktonic_scaffold_69592
Order: Planctomycetales (60%)
5 4920 bp 53.43 6.71 89.27
2019_SCN_bioreactor_t3_planktonic_scaffold_88417
Species: RBG_13_Planctomycetes_60_9_curated (50%)
2 1687 bp 53.88 6.85 89.27
2019_SCN_bioreactor_t3_planktonic_scaffold_20651
Species: Planctopirus limnophila (100%)
8 9654 bp 54.41 6.98 89.28
2019_SCN_bioreactor_t3_planktonic_scaffold_21751
Species: Gimesia maris (100%)
1 1485 bp 56.84 4.95 89.29
2019_SCN_bioreactor_t3_planktonic_scaffold_71134
Order: Planctomycetales (66.67%)
3 3951 bp 56.97 6.23 89.29
2019_SCN_bioreactor_t3_planktonic_scaffold_7019
Class: Planctomycetia (50%)
10 9168 bp 54.28 5.92 89.30
2019_SCN_bioreactor_t3_planktonic_scaffold_27148
Order: Planctomycetales (87.5%)
8 11540 bp 54.24 6.23 89.32
2019_SCN_bioreactor_t3_planktonic_scaffold_49446
Order: Planctomycetales (100%)
3 2418 bp 56.82 6.95 89.33
2019_SCN_bioreactor_t3_planktonic_scaffold_13352
Species: Gimesia maris (50%)
2 1575 bp 56.00 5.90 89.33
2019_SCN_bioreactor_t3_planktonic_scaffold_18025
Species: Planctopirus limnophila (50%)
4 5386 bp 54.64 6.49 89.34
2019_SCN_bioreactor_t3_planktonic_scaffold_10670
Species: Singulisphaera acidiphila (100%)
3 1719 bp 55.61 5.93 89.35
2019_SCN_bioreactor_t3_planktonic_scaffold_109658
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1494 bp 56.29 7.03 89.36
2019_SCN_bioreactor_t3_planktonic_scaffold_60548
Species: Gimesia maris (100%)
2 2004 bp 54.39 5.54 89.37
2019_SCN_bioreactor_t3_planktonic_scaffold_19357
Species: Gimesia maris (50%)
2 3835 bp 56.22 6.96 89.41
2019_SCN_bioreactor_t3_planktonic_scaffold_5341
Species: Gimesia maris (50%)
2 2882 bp 55.69 5.46 89.42
2019_SCN_bioreactor_t3_planktonic_scaffold_113497
Species: Planctopirus limnophila (100%)
1 1281 bp 53.32 5.50 89.46
2019_SCN_bioreactor_t3_planktonic_scaffold_91989
Class: Planctomycetia (50%)
6 7818 bp 53.62 6.58 89.52
2019_SCN_bioreactor_t3_planktonic_scaffold_15089
Species: Planctopirus limnophila (100%)
1 1652 bp 50.24 6.45 89.53
2019_SCN_bioreactor_t3_planktonic_scaffold_80135
Order: Planctomycetales (66.67%)
6 8544 bp 55.00 6.32 89.54
Displaying items 651-700 of 1189 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.