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scnpilot_p_inoc_scaffold_6643

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_6643_1
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1915)
DNA (1914bp) protein (638aa)
DNA relaxase n=1 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=Q5GRA2_ALCXX
DNA relaxase {ECO:0000313|EMBL:CAI47869.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xyloso
traI; conjugal transfer relaxase TraI
scnpilot_p_inoc_scaffold_6643_2
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1950..2321)
DNA (372bp) protein (124aa)
conjugal transfer protein TraJ n=1 Tax=Spongiibacter tropicus RepID=UPI0003B315F7
Protein traJ {ECO:0000313|EMBL:CCE25807.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcali
conjugal transfer relaxosome component TraJ
scnpilot_p_inoc_scaffold_6643_3
Sphingomonas sp. A1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2680..3084
DNA (405bp) protein (135aa)
TraK n=1 Tax=Sphingomonas sp. A1 RepID=Q4AC71_9SPHN
TraK {ECO:0000313|EMBL:BAE19712.1}; TaxID=90322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. A1.;"
TraK protein of DNA transfer system
scnpilot_p_inoc_scaffold_6643_4
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3084..3809
DNA (726bp) protein (242aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=H7EGF8_SALHO rbh
conjugal transfer protein TraL
TraL protein {ECO:0000313|EMBL:BAP34628.1}; TaxID=80870 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae subsp. avenae.;"
scnpilot_p_inoc_scaffold_6643_5

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3809..4249
DNA (441bp) protein (147aa)
Conjugal transfer protein TraM n=5 Tax=Bacteria RepID=E3HXT9_ACHXA
traM; conjugal transfer protein TraM
TraM {ECO:0000313|EMBL:AEV57177.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_6643_6

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comp(4385..5719)
DNA (1335bp) protein (445aa)
Upf54.4 protein n=1 Tax=uncultured bacterium RepID=Q8RSN7_9BACT rbh
Upf54.4 protein {ECO:0000313|EMBL:CAD24323.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
traN; traN-like protein rbh
scnpilot_p_inoc_scaffold_6643_7

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comp(5748..6095)
DNA (348bp) protein (116aa)
Stable inheritance protein n=1 Tax=uncultured bacterium RepID=Q8RSN6_9BACT
Stable inheritance protein {ECO:0000313|EMBL:AFR43975.1}; Upf54.8 protein {ECO:0000313|EMBL:CAD24324.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Conjugal transfer protein TraO
Displaying 7 items

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