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scnpilot_p_inoc_scaffold_2651

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2651_1
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..2492)
DNA (2490bp) protein (830aa)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:EOA04274.1}; EC=1.2.7.8 {ECO:0000313|EMBL:EOA04274.1};; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G3B6_9BURK
indolepyruvate ferredoxin oxidoreductase subunit alpha/beta
scnpilot_p_inoc_scaffold_2651_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2728..3684
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZG67_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT70707.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
putative transcriptional regulator (LysR family)
scnpilot_p_inoc_scaffold_2651_3
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3774..4289
DNA (516bp) protein (172aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1J4_SPHS2
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:ADZ79267.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; S
scnpilot_p_inoc_scaffold_2651_4
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4332..4928)
DNA (597bp) protein (199aa)
Putative Lysine exporter protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PPK9_9RHIZ
Putative Lysine exporter protein {ECO:0000313|EMBL:CCM75813.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
Cysteine/O-acetylserine efflux protein
scnpilot_p_inoc_scaffold_2651_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5062..5949)
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHH9_ACIET
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACM32884.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_2651_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6029..6868
DNA (840bp) protein (280aa)
phosphonate ABC transporter ATPase; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHH8_ACIET rbh
phosphonate ABC transporter ATPase
scnpilot_p_inoc_scaffold_2651_7
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6903..7781
DNA (879bp) protein (293aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=3 Tax=Burkholderiales RepID=A9BTP9_DELAS rbh
phosphate ABC transporter substrate-binding protein
Phosphite transport system-binding protein ptxB {ECO:0000313|EMBL:ABF09867.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" sou
scnpilot_p_inoc_scaffold_2651_8

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7778..8578
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DHE7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96831.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phosphonate ABC transporter permease
scnpilot_p_inoc_scaffold_2651_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8593..9561
DNA (969bp) protein (323aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHH5_ACIET rbh
d-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ACM32880.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax
scnpilot_p_inoc_scaffold_2651_10
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9569..9934)
DNA (366bp) protein (122aa)
hypothetical protein
hypothetical protein id=5081365 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Uncharacterized protein {ECO:0000313|EMBL:AFJ02148.1}; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga fra
scnpilot_p_inoc_scaffold_2651_11
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9960..10583)
DNA (624bp) protein (208aa)
Beta-lactamase class D n=1 Tax=Rhizobium sp. CF142 RepID=J2AQK3_9RHIZ
Beta-lactamase {ECO:0000313|EMBL:ETR75534.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
Class D beta-lactamase
scnpilot_p_inoc_scaffold_2651_12
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10863..11909)
DNA (1047bp) protein (349aa)
Transcriptional regulator, AraC family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJX2_ACCPU
Carnitine catabolism transcriptional activator {ECO:0000313|EMBL:KFB76272.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accum
AraC family transcriptional regulator
Displaying 12 items

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