ggKbase home page

scnpilot_p_inoc_scaffold_878_34

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 19487..20860

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI19_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 448.0
  • Bit_score: 742
  • Evalue 3.50e-211
  • rbh
RNA-directed DNA polymerase {ECO:0000313|EMBL:EIL99110.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 448.0
  • Bit_score: 742
  • Evalue 5.00e-211
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 403.0
  • Bit_score: 350
  • Evalue 6.50e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGACGAAGCCGCGCCAACCCCAGGGCCGCGCGGCCAGGTCGCAAGCGCGCGGGATAGCGGAGTCCCCTTCGGACTGCGCGTGGTACGTCAATTTCAACAACGGCAATTGCAACCTCAACAACCAGAACAACCAAGGCCGCGTCCGGGCCGTGCGTTCGGTGTCGCCGTCGGCGTCCAGTGAGTCTCAGGGTGCATCAGGCAAGGCCAGTTTCCGCGCTCTCCACCAGGCGTGGCAGCGCGCCCGGCGCCGCAAGGTGCCCAGCCAGAACCAATTGCAGTTCGAATCCAACTGGATCGACGGCCTGCTCGACCTGCAACAACAGATCAACGCTGGCACATGGCATCCGCGACCCACCACCTGCTTCATCGCGATCAAGCCCAAGGCGCGCCAGATCCACGCGCCGGATTTCGCTGACCGCATCGTTCACCACTGGCTGGTGCCGCAACTCGAGGCCATCTACGAGCCCGGCTTCATCCACCACAGCTACGCCAACCGCCGCGGCAAGGGCACCCATGCCGCCGTCGCCGCGCTGCGCAAACACGTGCGCCAGGTGCACAGCGGCCAGGGCGGCGGCTGGTACCTGCAGCTCGACATCCGCAACTTCTTCAACTCTATCCACCGCCCCACGCTCTACCGCATGCTCAAGCAACGCATGCAGCGTCGTGGCATGGCCATCACCACCCAGCGCGTCACCCACGCGCTGCTGCGTCAATCCGTCGAACGCCAGGGCGTGCAACACCGCTCCACCCCGGCCGAGCGCGCCCGCGTACCCGCCCACAAGCGGCTGGAAAACGCCGCGCCGGGCTGCGGCCTGCCGGTGGGCAACCTGTCGTCGCAGTTCTTCGCCAACGTCTACCTCGACGTGCTCGACCAGTTCATCAAGCACACACTCAAGGCGCCGCGCTACCTGCGTTACGTCGATGACTTCGTGCTGGTGCACCACAGCCGCGACCAGCTGCAAGCCTGGCTGGAACAGATCACCACCTTCCTGCGCACGCACCTGCGGCTGGAGCTGAAAGCCGACATCCGCCTGCGCCCGCTCACCGCCGGCATCGACTTCCTCGGCTACGTCACCTTCCCCACCCACACCCGCGTGCGCTCACGCGTCGTCAAGCATGCGGCGGCCGCGCTCAACGCCTGGCACCACGACCACGCCACCACCACCGGCGTCCGCTGCACCCCGGCCGAGCTGCGCCGGCTCGGCAGCATCTGGGCCAGCTATCGCGGCCACTTCGCTAACGCCGCCAGCTACCGCCTGCAACAACGCTTCCACGCGCGCCACCCGTGGCTCGCGCCATTGACCACCACCCGCCGCCGCTTCGACCACCGTCTGGAAGGCCGGCGCGTCACCGTGAGGATCCACCGTGCCTGA
PROTEIN sequence
Length: 458
MTKPRQPQGRAARSQARGIAESPSDCAWYVNFNNGNCNLNNQNNQGRVRAVRSVSPSASSESQGASGKASFRALHQAWQRARRRKVPSQNQLQFESNWIDGLLDLQQQINAGTWHPRPTTCFIAIKPKARQIHAPDFADRIVHHWLVPQLEAIYEPGFIHHSYANRRGKGTHAAVAALRKHVRQVHSGQGGGWYLQLDIRNFFNSIHRPTLYRMLKQRMQRRGMAITTQRVTHALLRQSVERQGVQHRSTPAERARVPAHKRLENAAPGCGLPVGNLSSQFFANVYLDVLDQFIKHTLKAPRYLRYVDDFVLVHHSRDQLQAWLEQITTFLRTHLRLELKADIRLRPLTAGIDFLGYVTFPTHTRVRSRVVKHAAAALNAWHHDHATTTGVRCTPAELRRLGSIWASYRGHFANAASYRLQQRFHARHPWLAPLTTTRRRFDHRLEGRRVTVRIHRA*