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scnpilot_p_inoc_scaffold_815_34

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(36693..37874)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTL3_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 380.0
  • Bit_score: 250
  • Evalue 2.10e-63
Efflux pump periplasmic linker BepF {ECO:0000313|EMBL:EWS53242.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 384.0
  • Bit_score: 326
  • Evalue 4.30e-86
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 380.0
  • Bit_score: 250
  • Evalue 6.00e-64

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Taxonomy

Methylibium sp. T29 → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGCCCGACCTACCCTCCCCCTCCAAGCCGCCGGTACGCAAGGCGATTGCCACCGCTGCGCTGCTGGCCGTGGCGTCCACGCTGACGCTGTACAGCACCGGTGGCAATCCGTTCTCACGCGCCGAAGCCGCCGAGTCCCCTGCCATGGCGCCCGAGGCGCCCGCCGTGGCGATCGCGACCGTCGAGTCGCGTGCGATCGCGCCCGAATCGACCTTCATCGCGCGCCTCGAAGCCGCCGGGCGGGTGGAACTCCGACCGCGCGTGGCCGGCCATGTGGAGGCCGTGCTGTTTCAGGAAGGGCAGTCCGTGAAGGCGGGGCAGCCCTTGTTCACTATCGACGCCCGCGGTTTCGACGCTGCCCTAGCCAGCGCGCAGGCCCAGCTGAAGCTGGCGCAGGCGCGTGAGCAGCGCGCCATCAGCGAAGCCCGCCGCGCGCGCGAGTTGCTGGCGCTGGACGCCATCGCCGCCGAAGAAGCCGAGCGGCGCAGTGCCGCGCAGACGGAGGCCCAGGCCCAGGTGGCGGCCGCCCAGGCTGCGCTGCGCGCGGCCCAGCTCGACCGCGAGTTCGCCACCGTGCGCGCACCGATCGACGGGCGCGTCGGCCGTGCGCTGGTGACCGCCGGAAACTACGTGGGCGTGGGTGCGGCACAGGCGCCGTTGGCGGTGCTGCTGTCCAGCCAGGCGCTGCAGGTGCATTTCGACGTCGCCGACCCCGCCATCCAGGCGCACCTGGCCCGCGCACGCAAACCCGACGCGATGAAGGTGACCCTGGTGGTTGAGCAGTCCGAGCAGCCCCTCGGCACGGCCACGCTCGACTTCGCCGACAACGAAATCGAACCGGGCACCGGCACGTTGCGGCTGCGGGCACGTGTCAACGCGCGCGACAGCGGCCTGCTGCCCGGCGCCTTTGTGCGCGTGCGGCTGGCCCACCCCCAGGCGGGAACCACGTTGCTGGTGCCCGACGCCGCCATCGGCACCGACCAGGGCCGCCACCACCTGCTGGTGGTGGACGGGCATGACACGGTGCAGTACCGCGCGGTGCAGCTTGGTGACCGCCACGGTGAGTTGCGCGCTGTCATCGGCGGCGTTCAGGCGGGCGAGCGCGTGGTGGCTTCAGGCCTGATGCGTATCAAGCCCGGCATGAAGGTTCGCGCCGCTGAACGCGCGGCCACCGCTGGCTGA
PROTEIN sequence
Length: 394
MPDLPSPSKPPVRKAIATAALLAVASTLTLYSTGGNPFSRAEAAESPAMAPEAPAVAIATVESRAIAPESTFIARLEAAGRVELRPRVAGHVEAVLFQEGQSVKAGQPLFTIDARGFDAALASAQAQLKLAQAREQRAISEARRARELLALDAIAAEEAERRSAAQTEAQAQVAAAQAALRAAQLDREFATVRAPIDGRVGRALVTAGNYVGVGAAQAPLAVLLSSQALQVHFDVADPAIQAHLARARKPDAMKVTLVVEQSEQPLGTATLDFADNEIEPGTGTLRLRARVNARDSGLLPGAFVRVRLAHPQAGTTLLVPDAAIGTDQGRHHLLVVDGHDTVQYRAVQLGDRHGELRAVIGGVQAGERVVASGLMRIKPGMKVRAAERAATAG*