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scnpilot_p_inoc_scaffold_1033_33

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(25604..26047)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=3 Tax=Proteobacteria RepID=G2I8R4_GLUXN similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 137.0
  • Bit_score: 213
  • Evalue 1.80e-52
MerR family transcriptional regulator {ECO:0000313|EMBL:ETR77832.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 137.0
  • Bit_score: 220
  • Evalue 1.60e-54
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 137.0
  • Bit_score: 213
  • Evalue 5.20e-53

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGACGGATCGCGCTATCGGACGGGGTTTCAAACGTAGTGAGTTGGCGCGTCAGACGGGCTCTAATTTAGAGACAGTCCGCTACTACGAAAAAATTGGGCTTCTTCCCGAGCCGCCGCGCAGCGCTAACGACTACCGCGTTTATAGCGAAGCCCATGTCCGGCGCCTCCGCTTCGTCATGCGTGGACGCGAACTCGGTTTCAGCATCGAGGAAATCCGCGGCCTTTTAGAGTTGGTCGACGGCGGCAAACAGACGTGCGCGGAGGTCAAAGAGCGTACTGAGCATCACCTCAGCGATGTTCGCGCAAAGATCGCAGACCTCAGGCGGATCGAAAAAATTCTAGCCCAAACCGCTGCACAGTGTTCGGGTGACGCCATTCCGGAATGCCCGATCCTCGATGCGCTTTCGTCATATCCAGACGTTGGCGATGCGGGGCACCGTTGA
PROTEIN sequence
Length: 148
MTDRAIGRGFKRSELARQTGSNLETVRYYEKIGLLPEPPRSANDYRVYSEAHVRRLRFVMRGRELGFSIEEIRGLLELVDGGKQTCAEVKERTEHHLSDVRAKIADLRRIEKILAQTAAQCSGDAIPECPILDALSSYPDVGDAGHR*