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scnpilot_p_inoc_scaffold_826_15

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(14558..14974)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein MarR n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDD9_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 133.0
  • Bit_score: 113
  • Evalue 2.40e-22
MarR family transcriptional regulator {ECO:0000313|EMBL:KIZ32963.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 133.0
  • Bit_score: 114
  • Evalue 1.50e-22
regulatory protein MarR similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 133.0
  • Bit_score: 113
  • Evalue 6.90e-23

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGACCACCCCCGACCTTGCATTGCTACTTGAGCAGGCCCAACGCCAGGTCTCGCGTGCACTTGATCGCACTCTGGGCGAGGTCGGAGCATCGGCAGAGCAATGGCGCGTCCTCGAGCGTCTAGCTGACGAAGAAGGGCGTCCGATTGGTGAGCTGGCCCAGAACCTGTCGATGAATCCGCCAACAATGACCAAGCTCATCGATCGAATGGTGGCAGGCGGACTGGTTCAACGCATTGTTGACGCCGAGGACAATCGCCGGGTCCTGGTGGTGATCACAGATGCAGGCCTTGACCTGCACAAGAAGCTTTCTGCCAAAGCATCTGAATTCCACGCAGACCTTGCCGAGTCATTCAGCGCTCGCGAGACAGCCCAGTTGAGCAAGCTCCTTGGGCACCTGGTCTCTCTGCGCCGCTAA
PROTEIN sequence
Length: 139
MTTPDLALLLEQAQRQVSRALDRTLGEVGASAEQWRVLERLADEEGRPIGELAQNLSMNPPTMTKLIDRMVAGGLVQRIVDAEDNRRVLVVITDAGLDLHKKLSAKASEFHADLAESFSARETAQLSKLLGHLVSLRR*