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scnpilot_p_inoc_scaffold_1733_16

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 13224..13769

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer signal peptidase TraF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGG7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 181.0
  • Bit_score: 353
  • Evalue 1.10e-94
  • rbh
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:EKS37473.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 181.0
  • Bit_score: 352
  • Evalue 4.40e-94
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 181.0
  • Bit_score: 317
  • Evalue 3.10e-84

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GTGAGCCGCGCCGGACTTCTCCTCGCGACCACGCTCGCGGCCCTTGGCGTCGGCTATCCCGGCCTCACGCCGATGCCAATCAAACTGATCTGGAACGCATCGGCGAGCGCACCGATCGGGCTCTACTCGATCGACTTCGACGGACCGTTCGAGATCACCGATCTTGTCGCCGTCGATGCGCCGGAGCCGCTCGCGACGTTCCTCGCCGAGCGCGGCTATCTGCCCAGGGGCGTGCCGCTGATGAAGCGTATCCTCGCCATCTCCGGTCAGACCGTTTGCCGCTCCAACCTCACCATCACGGTGGATGGCATCGAGGTCGGCGCAGCGCTCGAACGCGATCGCGCTGGTCGTGATCTTCCCGTCTGGCAGGGCTGCCGCCGCGTCCAGACCGGCGAAGTCTTCCTCATGAATTGGCAGGTCCGCGACAGCCTCGACGGCCGCTACTTCGGCCTGATCTCGACCGACCAGATCATCGGCCGCGCCGTCCCGCTGTGGACCGACGAGGACGCCAACGGCCGCTTCGAATGGCGCACGCCGACACGCTGA
PROTEIN sequence
Length: 182
VSRAGLLLATTLAALGVGYPGLTPMPIKLIWNASASAPIGLYSIDFDGPFEITDLVAVDAPEPLATFLAERGYLPRGVPLMKRILAISGQTVCRSNLTITVDGIEVGAALERDRAGRDLPVWQGCRRVQTGEVFLMNWQVRDSLDGRYFGLISTDQIIGRAVPLWTDEDANGRFEWRTPTR*