ggKbase home page

scnpilot_p_inoc_scaffold_2551_14

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 11873..12307

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANX4_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 102.0
  • Bit_score: 123
  • Evalue 1.40e-25
RND transporter {ECO:0000313|EMBL:KEH08193.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 102.0
  • Bit_score: 124
  • Evalue 1.20e-25
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 102.0
  • Bit_score: 123
  • Evalue 4.10e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia tsuruhatensis → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGAGTCATATGCCTGTTTGCCGTCCTGCCGCATCGGGAAGCACTGGCGCCCCGCACGATCAGAACGCCGATGCCCGCGCCGGCATCGCTTCCGCAGCGCGCGCCAAACGCACCGGCTGGCCATGGCGACATGCCATGGTCGCCGCGGCCGTCGGCGCGCTCTGTTCGGGCTGCGCATCCCTGGCGCCGCAGTACGACGCGCCCCCCTCGCCGGTGCCGGACACCTGGCTGGACGCCGCGCAAGGCGCGCAAGGACATGCCGCATCGGCCCTCGCGTGGAACGACTACTTCACCGACCCGATGTTGAAGCGGTTGATTCAGACCGCGCTGGACAACAACCGGGATCTGCGCGTGGCCCTGCTGCGGGTCGAGGAAGTCCGTGCGGCGTACCAGATCCAGCGCGCGGACCTGTTCCCGCAGGTCAACGCGGGGGCG
PROTEIN sequence
Length: 145
MSHMPVCRPAASGSTGAPHDQNADARAGIASAARAKRTGWPWRHAMVAAAVGALCSGCASLAPQYDAPPSPVPDTWLDAAQGAQGHAASALAWNDYFTDPMLKRLIQTALDNNRDLRVALLRVEEVRAAYQIQRADLFPQVNAGA