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scnpilot_p_inoc_scaffold_2568_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(4541..4864)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G681_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 159
  • Evalue 2.30e-36
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 159
  • Evalue 6.50e-37
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABD26642.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 159
  • Evalue 3.20e-36

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGCATCGGCGCTCGGAACGAAAATCAACGAGCTGCGCCGCGGAAAGGGTTTGACCCTCGAAGAGCTTGCAAAGGCAACCGGCAGCTCGAAAAGCTATATGTGGGAGATTGAAAACAAGGATGTAGCAAGGCCATCCGCCGAGAAGCTTGATCGTATCGCGGCGGCTTTGGGCGTCACTGCCGACTATCTGATCGACGCCACCGCGGCCGCGCCAACTGACGACGTTCATGATCGGGCCTTTTTTCGAAAATTCCAAAAGGCGGATCCGGCGGTGAAGGACAAAATAAAAAAAATCCTCGACGTGCTTGATGAGGACGACTGA
PROTEIN sequence
Length: 108
MASALGTKINELRRGKGLTLEELAKATGSSKSYMWEIENKDVARPSAEKLDRIAAALGVTADYLIDATAAAPTDDVHDRAFFRKFQKADPAVKDKIKKILDVLDEDD*