ggKbase home page

scnpilot_p_inoc_scaffold_2203_9

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(11342..12019)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F84F0 similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 222.0
  • Bit_score: 348
  • Evalue 4.30e-93
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus. similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 223.0
  • Bit_score: 332
  • Evalue 5.80e-88
two component heavy metal response winged helix family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 223.0
  • Bit_score: 328
  • Evalue 1.30e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithiobacillus ferrivorans → Acidithiobacillus → Acidithiobacillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCCCCGAATCCTGATCATTGAAGACGAGCAGAAGATCGCTTCTTTCGTAAGACAAGGGTTTTCGCAGGAAGGCTTCGTGGTCGATGTCGCTTCGGACGGCATCAACGGACTTCATCTTGCGACGACTTCCGAATATGACCTGATCGTCCTCGATGTCATGTTGCCGGGACGGGATGGCTGGTCGGTGCTTCAGGAAATCCGAAAGCATCGCCCGGGCCAACCGGTCATCCTGCTCACCGCGCTGGATGCGGTCTCGCACCGGGTGAAGGGGCTGTCCGCCGGCGCCGACGACTATCTGGTCAAGCCTTTTGCGTTTTCGGAACTGCTGGCGCGCGTACGCAACGTCTTGCGCCGGGCACCGGCGCGTCCGATGGAAATGCTTCGGCTCGACGACCTCGAAATGGACCTGCTACGGCATAAAGCGAGCAGGGGCGGGAAGCCGATGGACCTGGCCCCGCAGGAATACCGTCTTCTGGAATATCTGCTGCGTCACCCTGGTGAAGTGCTCACGCGCACGCGACTTGCCGAACAGGTGTGGGACATGAATTTCGACGGCGACAGCAATGTCGTCGATGTGGCCATCCGCAGGCTGCGAAGAAAAATTGATGATGCGTTTGAGCGGAAGTTGATTCATACCTTGCGCGGCGTGGGCTATGTTCTGGAAACGCGGGATTGA
PROTEIN sequence
Length: 226
MPRILIIEDEQKIASFVRQGFSQEGFVVDVASDGINGLHLATTSEYDLIVLDVMLPGRDGWSVLQEIRKHRPGQPVILLTALDAVSHRVKGLSAGADDYLVKPFAFSELLARVRNVLRRAPARPMEMLRLDDLEMDLLRHKASRGGKPMDLAPQEYRLLEYLLRHPGEVLTRTRLAEQVWDMNFDGDSNVVDVAIRRLRRKIDDAFERKLIHTLRGVGYVLETRD*