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scnpilot_p_inoc_scaffold_2212_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(35..940)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ6_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 301.0
  • Bit_score: 460
  • Evalue 1.00e-126
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 301.0
  • Bit_score: 460
  • Evalue 2.90e-127
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM39474.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaro similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 301.0
  • Bit_score: 460
  • Evalue 1.50e-126

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Taxonomy

Polaromonas naphthalenivorans → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGAACTGCGACATCTCCGCTATTTCATCGCCGTGGCTGAAGAACTCCACTTCGCCCGCGCTGCAGAACGTCTGCACATCGAGCAGTCGCCGCTCTCGCGCGCCATCAAGGAACTGGAACACGTCCTGAGCGTTCAGTTGTTCGAGCGCACCACCCGCAGCACACGGTTGACTTGGGCCGGGCAAGTTTTTCTGGAGGATGTCCGGCGCGTCTTCATTACGATTGATCAAGCCAAGGCAAGCGTGAAAGCCGCAGCCACCGGCTATCGCGGCATTCTGCGTATCGCGCTTTCCGACAGTGTCGCCCAGCCGCGGCTTGCCGCATTGCTAGCCCGATGCCGGGAAGAGGAACCGGATGTGGAAATACGCCTGTTTGAAAAGCCACTCTCGCAGCAGATAAAGGGCTTGCGCAGCGGTTTGTACGATGCGGGTTTCGCGCAGTCCGACGATGTGGGTCAAGGCATCGTCGCCGAGCCGGTGTGGAGCGATGCGCTCGTGGTCGCCGTTCCCGCACGTCATCCGCTGCTGGCGCACAAACGCATCCCGCTGGACGAAGTGTTGCGATATCCCCTGGTACTGTGCCAGCCGGAAATGTGCGAAGGCTACTGCCGGCAAATCGAGGCCGTATTGCGTTCCGCAAATACGCAACCCATCGTGGCGGAGTATGTTGCCACGCTCGATCTGATGATGACGCTGGTGACCGCGGGCTACGGTCTGGGCTTCGCCAGTGCTTCGCAGATTCCCGTATGCCGCCACCAGGAAGTGGTTGCGCGTCCATTGGCCGGGCGCTCGCCGATGCTGACGACCTACCTGCTGCGACCTGACATCGATCCGTCCGAGCAGTTGAATCGTTTTATCGACCGGGCCAATCCGGCCAAACCACTGGCACGCGACAACCCAACATGA
PROTEIN sequence
Length: 302
MELRHLRYFIAVAEELHFARAAERLHIEQSPLSRAIKELEHVLSVQLFERTTRSTRLTWAGQVFLEDVRRVFITIDQAKASVKAAATGYRGILRIALSDSVAQPRLAALLARCREEEPDVEIRLFEKPLSQQIKGLRSGLYDAGFAQSDDVGQGIVAEPVWSDALVVAVPARHPLLAHKRIPLDEVLRYPLVLCQPEMCEGYCRQIEAVLRSANTQPIVAEYVATLDLMMTLVTAGYGLGFASASQIPVCRHQEVVARPLAGRSPMLTTYLLRPDIDPSEQLNRFIDRANPAKPLARDNPT*