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scnpilot_p_inoc_scaffold_2465_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(9337..11277)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX8_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 644.0
  • Bit_score: 984
  • Evalue 5.80e-284
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 646.0
  • Bit_score: 1138
  • Evalue 0.0
Type VI secretion protein {ECO:0000313|EMBL:AJP47688.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6. similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 646.0
  • Bit_score: 1138
  • Evalue 0.0

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Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
ATGAGCAAGCAGGACGATGACCGTTTCCGCATCCGCCCCAGCGCTCCCAGGAACCAACAACAGAAGTTCGTCTCGCAGGTTTTGAAGGAGGTCAGCAAGACTGGCGGCAAGTCGGTGCGCAAGTCGGGAGCCCGACCCGGCGCACGCCTTGGTCGCGGGCATGTAGCCGCCGGTTTCACCGGCCGCTCTACGCAGCCTGGCTCACGGCGCGTCACCATCAAGACCCGGCTGGTGAACCTCAAACAGGCCGGGGCACGCTCGACTACCACGCATCTGCGCTACATCGAGCGGGAGGGCGTGGGCCGCGATGACGAACCGGGCCAAACCTATGGATCAATAACGGACAACGCCGATCTGGCCGCCTTCGAGGAACGCGGCCGGGAGGATCGGCACCAGTTCCGCTTCATTGTCTCGCCCGAGGACGCCGAGCAGCTCGACGACCTGCGCACCTATACCCGCCACCTGATGAGCCGCATGGAAGCCGACCTGGGTACACGGTTGGACTGGGTGGCCGTCGATCACTGGAACACCGACAACCCGCACACCCACGTCGTGCTGCGCGGCAAGGACGATAGGGGCAAGGATTTGATCATTTCCCGCGACTATATCGCGCACGGAATGCGCGAGCGGGCCTCGGAACTGGCGACAGAATGGCTGGGGCCGCGCACCGAGCTGGAGATACAACAGAGTCTACGGCGGGAGGTCGATCAGGAACGTTGGACCAGCCTGGACCGCACGCTGCAACGCGAAGCGCAAGGTGGGCTCGTCCACATCAATCAACCCACCGAAGACCCCAAGCGCAGGCAGCTGCGCGCGCTATTGATCGGGCGACTGCAACGTTTGCAGCACATGGGACTGGCGCACGAGTCATCGCCCGGCGTGTGGGCCATCCAAGCCGATGCCGAACAGGTTCTGCGGACGATGGGGGAACGTGGCGACATCGTGCGCACGATGCAGCGGGCCATGAGCGGCACGCCGCGCGACTTCGTAGTGTTCGAGCCGGGCGAGAACGCTCGCCCCGTGGTCGGTCGTGTCGCTGCCAAGGGCATGGCTGACGAGCTGCATGACCGTGGCTATCTGGTCATTGATGGCGTGGACGGCAAGGCGCACTACGTTGCCTTGAACGCCAAGGTGGAACTGGAGCAGTACCCGGTCGGGGCCGTGGTGGAGGCACGCGGGTCGGCCGAGATTCGCGCGGCCGACAAGAACATCGCCGCGCTCGCGGTCGATGGCCTGTACCGCACCGACCATCACCTGGCGATGGCCACGGCCCAGGCCATGCCTACGCACGACCCCAAGGAGGTAGTTGATGCCCATGTACGCCGACTGGAAGCACTGCGCCGGGCGGGCATTGTCGAGCGCGCGGCCGAAGGGGTCTGGCGGGTGCCGAAAAACCTGCCCGAGCGAGGTCGGCAATACGATGTGCAGTGTCTGGGCGGCGTATCGGTGGAAATGCGTTCGCACCTACCCATTGAGCGGCAAGTCCGCGTGATCGGCGCGACCTGGCTGGATCGGCAGTTGATCGATGGCGCCAGCCGTATCGCCGACAACGGCTTCGGCGGCGAGGTGCGCGAAGCGCTGCGGCAGCGGTCGGATTTCCTGGTCGAACAGGGTCTGGCCGAACGGCGCGGCTCACGCGTGGTTTTAGCGCGCAACCTGCTAGCCACCTTGCGCGGACGCGAGATAGAGGGTGCGGCCAAGACCATCGCTGCGGAAACCGGCCTCACGCATCGGGCCGTCGCCGACGGCGAGCGCGTGACCGGCACCTACCGCCGCAGTGTGCAACTTGCCAGTGGCCGCTTCGCGATGCTGGACGATGGCATGGGTTTCAGCCTGGTACCGTGGAGGCCAGTGGTGGATCAACGACTGGGGCAGCAGGTATCGGCCATCGTGCGGGGGTCATCGGCTACGTGGGAGTTGGGGCGGCAGCGTGGACGGTAG
PROTEIN sequence
Length: 647
MSKQDDDRFRIRPSAPRNQQQKFVSQVLKEVSKTGGKSVRKSGARPGARLGRGHVAAGFTGRSTQPGSRRVTIKTRLVNLKQAGARSTTTHLRYIEREGVGRDDEPGQTYGSITDNADLAAFEERGREDRHQFRFIVSPEDAEQLDDLRTYTRHLMSRMEADLGTRLDWVAVDHWNTDNPHTHVVLRGKDDRGKDLIISRDYIAHGMRERASELATEWLGPRTELEIQQSLRREVDQERWTSLDRTLQREAQGGLVHINQPTEDPKRRQLRALLIGRLQRLQHMGLAHESSPGVWAIQADAEQVLRTMGERGDIVRTMQRAMSGTPRDFVVFEPGENARPVVGRVAAKGMADELHDRGYLVIDGVDGKAHYVALNAKVELEQYPVGAVVEARGSAEIRAADKNIAALAVDGLYRTDHHLAMATAQAMPTHDPKEVVDAHVRRLEALRRAGIVERAAEGVWRVPKNLPERGRQYDVQCLGGVSVEMRSHLPIERQVRVIGATWLDRQLIDGASRIADNGFGGEVREALRQRSDFLVEQGLAERRGSRVVLARNLLATLRGREIEGAAKTIAAETGLTHRAVADGERVTGTYRRSVQLASGRFAMLDDGMGFSLVPWRPVVDQRLGQQVSAIVRGSSATWELGRQRGR*