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scnpilot_p_inoc_scaffold_2746_10

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(8042..8755)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI2_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 237.0
  • Bit_score: 396
  • Evalue 1.40e-107
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 237.0
  • Bit_score: 396
  • Evalue 4.10e-108
LysR substrate-binding protein {ECO:0000313|EMBL:ADV00456.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 237.0
  • Bit_score: 396
  • Evalue 2.00e-107

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGACCTGCGTCACATCCGGGCCTTCATTGCAGTGGCCGAGGAGTTGCACTTCGGCCGCGCGGCGAAGCGCCTGCATATCGAGCAATCACCCCTATCCCGCACGATCCGCAAGCTGGAGGCCGACTTGGGAGTGACCCTGCTCCAGCGCACGCCGCGCGGTGCCAGCCTAACCTGGGCCGGGCGCGCCTTTCTGCAGGATGCCCGCCGCGTCATACTGGCCGTCGAGCACGCCGAAGCCAGAGCACGCGCGGCGGCCGAGGGGTATCAGGACACGCTGCGCATTGCGCTGGCGGGCGACATCGGACGGGTTCGACTGTCGACGTTGCTCGCACTGTGCCGACAGGAAGCTCCGCAAGTGAACATCCGGCTGTCAGAGGTGCCACTCGCTCAATTGGTGCATGGACTGAGCACGGACCTGTTCGATGCCGGCCTTGCGATGATCGATGACGTGGACGCTGGGATTGTTGCGGCACCGTTGTGGGAAGACCCGTTGGTGGTCGCTCTTCCTGCGCGACATCCGCTACTGGTCTTCAAGGAGGTGCCCCTGGAAGAAGTGGTGAGCTATCCGCTGGTGCTGTGCGATCCACAGGTTTGCGAAGGCTGCAGCCGACAGCGCGAACGGCTGTTCCGATCAGTCGAGGCTCGGCCGATAGTGGCTGAATATGTCCCTACTCATGGCCTGATGTTGGCGCTGGTGGCCGCGGGCTACTGA
PROTEIN sequence
Length: 238
MDLRHIRAFIAVAEELHFGRAAKRLHIEQSPLSRTIRKLEADLGVTLLQRTPRGASLTWAGRAFLQDARRVILAVEHAEARARAAAEGYQDTLRIALAGDIGRVRLSTLLALCRQEAPQVNIRLSEVPLAQLVHGLSTDLFDAGLAMIDDVDAGIVAAPLWEDPLVVALPARHPLLVFKEVPLEEVVSYPLVLCDPQVCEGCSRQRERLFRSVEARPIVAEYVPTHGLMLALVAAGY*