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scnpilot_p_inoc_scaffold_2797_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3588..4472

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2F3_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 286.0
  • Bit_score: 432
  • Evalue 3.00e-118
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 286.0
  • Bit_score: 432
  • Evalue 8.30e-119
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB35606.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (s similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 286.0
  • Bit_score: 432
  • Evalue 4.10e-118

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGACCCTCAACTACCGTCACCTGCACTACTTCTGGGTCGTGGCAAAGGAAGGCGGGTTCGCCCGCGCCGCAGAACGCCTGGACATGGCTGTCCAGACCATCAGTGCGCAGGTCAAGGAGCTGGAGAAGTCCCTTGGGTACCAGCTCCTCAAGCCGCAGGGCCGGGGCTTTGTGCTCACGGAGGCGGGCGAGACCGCTTTCGCGCGCGCCGAGGAGATCTTCCGGATCGGCCACGCCCTGCCAGGCGAAGTGAAGGAGGCCGCCAGCCACAAGGCGGTGCGACTGGCTGTGGGCTTGTCGGACGGCATCTCCAAGCTTGCCGCCCATGCCCTGCTGGGCCCGGTGCTGGCGACGCCGAACCTGCGGCTCGTCATCCACGAGGGAGAGTTCGAGCAGCTGCAGTCCGAGCTGGCCCTGCACCACCTGGACGTGGTGCTGGCGGGACAGGCCGCGCCCCACAACCCCAACTTGCGGCTCGCCAGCGAACGGCTGGCGTCATCACCCGTGGACTGGTACGGCCCGAGCGCGCTTGTCGGGCGGGGCGCGACCAGAGATTTCCCTGCATGTCTGGCGCAGTTGCCGGTATTGCTGCCTACCGGTCATGCTGTCTTGCGCTCCGCGCTGGATCGTTGGTTCGATCAGCAGGGATTGCGTCCTCGCATTGCCGGCGAGTTCGAGGACAGCGCCCTGATGGCGGTTTTTGCCGCACAGGGCCTGGGGGTGTTTCCGGTCAGTCGCCTGGGTGCGCGCGATTTGCTACTGCTTCGTGGCATGCGGCTGCTTGCTCAATGCGAGGACGTGCGCGAGGACATCTACGCCATCCGATCGCGCCGTGGTCTGCACCATCCCCTGGCCCGCAAGCTCGCGCACACCAACGAACCATGA
PROTEIN sequence
Length: 295
MTLNYRHLHYFWVVAKEGGFARAAERLDMAVQTISAQVKELEKSLGYQLLKPQGRGFVLTEAGETAFARAEEIFRIGHALPGEVKEAASHKAVRLAVGLSDGISKLAAHALLGPVLATPNLRLVIHEGEFEQLQSELALHHLDVVLAGQAAPHNPNLRLASERLASSPVDWYGPSALVGRGATRDFPACLAQLPVLLPTGHAVLRSALDRWFDQQGLRPRIAGEFEDSALMAVFAAQGLGVFPVSRLGARDLLLLRGMRLLAQCEDVREDIYAIRSRRGLHHPLARKLAHTNEP*