ggKbase home page

scnpilot_p_inoc_scaffold_3365_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3747..5345

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated Cse1 family protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 530.0
  • Bit_score: 835
  • Evalue 5.00e-239
CRISPR-ssociated protein, Cas1 id=3539111 bin=GWC2_OP3-like_45_7 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica) similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 543.0
  • Bit_score: 643
  • Evalue 2.00e-181
  • rbh
CRISPR-associated Cse1 family protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 534.0
  • Bit_score: 539
  • Evalue 1.50e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGAGCCGCTTCAATCTGATCGACGAGCCCTGGATTCCCGTCCGTTACCCCGACGGCAGCCGGAACGAACTCGGCATCCGCGACACCCTGTTGCGCTCGAAGGAAATCGCAGCCATCGAAGACCCATCGCCGCTGGTCGTCGCAGCCTTACATCGCTTTTTGCTCGCCGTGCTGTATCGCGCACTCGAAGGGCCGACCGACATCGACCAGGCCAAGGCGCTATTCAAATCTGGCATTCCGGACGAAAAAATTGCCGCCTATCTGGAAAAGTGGCGGCCTCAATTCTGGCTGTTCGACGAGCAGTATCCATTTTGTCAGGTGCCATCTTTCAAACCAAAAAAATGGAGAACTTGGGCCGCTCTTGCTGTCGAACACAACGCAGACACAGCCAAGGTTCTCTTCGATCATGTGAATGAGGCAGAACCCGGGAGCATTAGCCCCGCTACGGCAATACGTTGGCTGGTTGCAACTCAAACTTTTGCAGTTTCGACGGGCAAGAGTGAGGTTTCCCACACGGGCACGGCTCCATCAGCAGGATCAATCATGGCAATTCCAATTGGACGTAGCCTTCAAGACACACTGCTATTTTGTCTGGTTCCCCAGAACAGAATGGTGATGGAGGGTGACTTGGCACTGTGGGAGAAGACTCCTGAAACGATTGAATACCTGAAAACAAAAATAAAAGTACAAGACAAAAATTCCGGGGAATATAAAGATCGGACTGTTGAAAGGGGGGCAAGCGGGATTGTGGATTTGTACTTGTGGCGGACTCGCTCGGCCATTTTTCGTGATACGGCCTCTGGCCACATCTCTGAGTTAGGTTTTGCATCTGGTATTGGGTACAAGGAGTCCATGGAATGCGACCCTATGCTCGGATACACAATAAAGGAAGTTACAGATAAAGAAACAAAGGCCAAAGTGAAAAGGAAGTTCTCGCTACAGTTTGAAGAAAAAGGAGCATGGAGAGATTTCGATTCACTGCTACCAGATGCAGATCGCCTTGCTCCACAGGTTATAGAGCATGCAGTAACGCTAACAAGGAAGGAACGCGAAAGGTTTCCCAAGGGGGTAATGGTTCTTGGCCAAAGATATTTCCCGCCCAGACCAAATATTGCATTCTGGAGAAAAGAATACTTTGCGCTCCCTGAAGCGATCTCAGGAGAACGCGACATACGTCACGAAGTCCATGACATGCTTGTTGATGCAGAGAGTGCCGCCACTAGCTTGAATATCGCCTGCGAATCCTTTGCCAGAGATTTGCTAGGGCATGGTGGGCGGAAAGTTGAGAAGGCGGATGCCCGGAATTTTATTGCGCAATTATCTTCCCCTGCTCGATATTGGTCTCAATTGGAGGTTAGATTCCACGAAATCCTGCGTGAATACACCTTGGAGCGCGAGCCCGACGATATACGTTGCCAATGGCTAAAAGCAGTGCGAAGCGAATTGCGCCAGGCTTGGACTCAACACAGCGCCGCCGTTTCAACCGGCGACGTCTGGGCTATCCGTGCCCTCGTCAAAGCAGAGGCTACGGTGATGCGCAAGTTGAAAGAACTGAACACTGAAATCCTGAAATTCGAACCGCAAAAGGAACCCACATGA
PROTEIN sequence
Length: 533
MSRFNLIDEPWIPVRYPDGSRNELGIRDTLLRSKEIAAIEDPSPLVVAALHRFLLAVLYRALEGPTDIDQAKALFKSGIPDEKIAAYLEKWRPQFWLFDEQYPFCQVPSFKPKKWRTWAALAVEHNADTAKVLFDHVNEAEPGSISPATAIRWLVATQTFAVSTGKSEVSHTGTAPSAGSIMAIPIGRSLQDTLLFCLVPQNRMVMEGDLALWEKTPETIEYLKTKIKVQDKNSGEYKDRTVERGASGIVDLYLWRTRSAIFRDTASGHISELGFASGIGYKESMECDPMLGYTIKEVTDKETKAKVKRKFSLQFEEKGAWRDFDSLLPDADRLAPQVIEHAVTLTRKERERFPKGVMVLGQRYFPPRPNIAFWRKEYFALPEAISGERDIRHEVHDMLVDAESAATSLNIACESFARDLLGHGGRKVEKADARNFIAQLSSPARYWSQLEVRFHEILREYTLEREPDDIRCQWLKAVRSELRQAWTQHSAAVSTGDVWAIRALVKAEATVMRKLKELNTEILKFEPQKEPT*