ggKbase home page

scnpilot_p_inoc_scaffold_5011_9

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 6409..7404

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035F48C6 similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 324.0
  • Bit_score: 404
  • Evalue 7.40e-110
  • rbh
phage-related integrase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 324.0
  • Bit_score: 362
  • Evalue 7.70e-97
integrase similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 340.0
  • Bit_score: 307
  • Evalue 4.50e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_61_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGGGACGCAAGCGGAGCAAGAACCACCACCTGCCGCCGCACATGGCCCAGAAGGGCCAAGCCTATTACTACGTGACGAATTCGACGCCGCGCAAGTGGATACCGCTTGGGAATGACCTTCACCAGGCGCGGCTGAAATGGGCCGAGCTCGAACGCGAGCCGATCGACCCCCAGGACAAAACCTTCGCCGTGATCGCCGAACGCTACCGGCGCGAAGTGCTGAACCAGAAAGCGCAGCGCACGCAGCGCGACTACCGCGAATCCCTCGAACGCCTGGTCAGCGTCTTCGGCCACATTCCGATTGATGCCATCACACCGCAGGACGTACGCGAATACATGAACCGGCGAGGCGAGAAAGCGAAGGTGCGCGCCAACCGTGAAAAGGCCATGCTCTCGACCCTCTACAACCACGCGCGGGAATGGGGTTACACCACAGCAGCCAACCCGTGCGCCGGCGTCAAAGGCTTCAAGGAAGCTGGGCGCGACAGGTACGTCGAAAACGCCGAATATATGGCCGTATGGCAGGCCGCCAGTGTCCCGATACAGGACGCAATGGACATTGCCTATCTGACGGGCCAGCGACCCGCCGACGTGCTGAAAATGCGCCGTGCCGACATCCGGGACGGTTTCCTGTGGGTGACGCAGAACAAGACCGGGCAGAAGCTGAGGGTGGAAATCATCGGCACACTGAAAACCGTCTTAGATCGCGTCCTGAGCCGGCCGCGTGCCGCTTCCGGCCTGTCTCTCATCCAGAACGAAAAAGGCCAGCCATTGAGTATCAGCGAACTGCGCGGCGGCTTCGACCGCGCGAGGGAGAAAGCAGGCGTCAGCTTCCAGTTCCGAGACCTGCGCGCCAAGGCCGCCACAGACACAGAAGACCTGCACCACGCACAGAAGCTGCTTGGCCACACCACGCGGGCGATGACTGAGCACTACACCCGCAAGCGGATAGGCGACACCGTCAAGCCAGTGGGCACGAAGCGGGAAAAATTGTAG
PROTEIN sequence
Length: 332
MGRKRSKNHHLPPHMAQKGQAYYYVTNSTPRKWIPLGNDLHQARLKWAELEREPIDPQDKTFAVIAERYRREVLNQKAQRTQRDYRESLERLVSVFGHIPIDAITPQDVREYMNRRGEKAKVRANREKAMLSTLYNHAREWGYTTAANPCAGVKGFKEAGRDRYVENAEYMAVWQAASVPIQDAMDIAYLTGQRPADVLKMRRADIRDGFLWVTQNKTGQKLRVEIIGTLKTVLDRVLSRPRAASGLSLIQNEKGQPLSISELRGGFDRAREKAGVSFQFRDLRAKAATDTEDLHHAQKLLGHTTRAMTEHYTRKRIGDTVKPVGTKREKL*