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scnpilot_p_inoc_scaffold_4193_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3461..4288

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D1A9A4 related cluster n=1 Tax=unknown RepID=UPI0003D1A9A4 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 262.0
  • Bit_score: 292
  • Evalue 4.50e-76
Peptide ABC transporter permease {ECO:0000313|EMBL:KJZ61470.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 260.0
  • Bit_score: 296
  • Evalue 3.30e-77
ABC-type dipeptide/oligopeptide/nickel transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 260.0
  • Bit_score: 286
  • Evalue 6.90e-75

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGATCCGCCTGTTCCGTTCTCTTGGCTGGATCGGCTTTGGCCCCAGCCTGCTTGTCAGCGTCGTGATATTGGCAATCGTCGGCTTGGTCTGGACGCCCTTCGATCCCAACGCACTTGATTTCGCGCATCGTTACCTGCCGCCGGCTTTGCCTTATGTGACCGGCACCGATCATCTGGGGCGCGACCTGTTCAGCCGCCTGCTGCTGGGCGCTTCAACCAGCGCCGCCGTCAGCGGTTCAGCGGTCATCGGCGCCCTGCTGATCGGCAGCCTGCTTGGAGCCATTTCCGGCTATTTCATGGGATGGCCGGACCGAATTGCCATGTTGGTGATGGATGCCATCCTGGCCATGCCGGGCATTCTGCTGGCCCTGGCCATCATGACGGTTACCGGCCCCAGCGTGGCCGGGCTGATCGGAGCCATGGCGGTTACATTTACGCCCGTTGTCTTCCGGGTGGTGCGTTCGACGGTGCTGTCCTTGCGCGAAAAAGAGTTTATCGAGGCCTCGCGTGCGCTGGGGAACCGGGATTTCTTCACGATCGCCTACCATATCCTGCCCAATTGTGTGGCCCCGTTGACGCTGGTTGGCACCAGCCTTTTCGGCTCTGCGGTGCTCACCGAAAGCGCCTTGAGTTTTCTGGGTCTGGGGGTGCCGCCGCACGTGCCGACATGGGGTGCCATGCTCTCGGATGGACGCAATATTTTCTCGCAGGCGCCGTGGGCCGTCATCTATCCCGGACTTGCCATCTCCTATCTCCTGCTGGGGGTCAACCTGACGGGCGATAGGCTGCGCGACCTGCTCGATCCTCGGGTAAAAGGACACATCTGA
PROTEIN sequence
Length: 276
MIRLFRSLGWIGFGPSLLVSVVILAIVGLVWTPFDPNALDFAHRYLPPALPYVTGTDHLGRDLFSRLLLGASTSAAVSGSAVIGALLIGSLLGAISGYFMGWPDRIAMLVMDAILAMPGILLALAIMTVTGPSVAGLIGAMAVTFTPVVFRVVRSTVLSLREKEFIEASRALGNRDFFTIAYHILPNCVAPLTLVGTSLFGSAVLTESALSFLGLGVPPHVPTWGAMLSDGRNIFSQAPWAVIYPGLAISYLLLGVNLTGDRLRDLLDPRVKGHI*