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scnpilot_p_inoc_scaffold_6136_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 541..2475

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI0003678BAC similarity UNIREF
DB: UNIREF100
  • Identity: 29.7
  • Coverage: 660.0
  • Bit_score: 262
  • Evalue 1.20e-66
Uncharacterized protein {ECO:0000313|EMBL:KJS33302.1}; TaxID=1629711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. B similarity UNIPROT
DB: UniProtKB
  • Identity: 30.5
  • Coverage: 636.0
  • Bit_score: 247
  • Evalue 7.10e-62
type ii secretion system protein e similarity KEGG
DB: KEGG
  • Identity: 27.7
  • Coverage: 622.0
  • Bit_score: 196
  • Evalue 2.20e-47

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Taxonomy

Pseudomonas sp. BRH_c35 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1935
ATGAAAACCATTCGTCCTGCCGCTCTTGCCCCGGAAATTCAGGTTCTTTTCACTGAATGGGCCGTGCCAACCACCGAGTACACGTCCCGGCTCTTTACCTATGCAAACACCATGCTTCAGATTCCCAACGATCACCGGATCGGGGACATGGTGGTTGCATTCGGCCTGGCTACCCGCGAAGAGGTCGAGCTGCACGCGAAAACCAAACCCGGCAATATGCTGATGCTCGAGCACCTGTCCGAGCGAATCGAAAATATCCGCGTCAATGCGCAAAAACTCCTGGCAGCCAACGACCATCTTGCCTATTACGATTTCGTGCCGGCCGGCAGCATTCATCCGGCCCTGCATGAGAACGAGCCTCTGCGGAAATTCTGCATCGCCCGCAATTGCCTGCCCCTCATCGGCTACCCGAGCAACTGTTTGCGCGTGCTATTTGCCGATTACGCCGCGCTCAAGGAATACCGGGAAAGTCCTCGCCTCAATCGCATGACGGACCCGTTGGGGACGCTCTGCGCCAGCGAACGCCTTTCCCTCCAGATCGTCTATGGAATTGCCGAACGCAACCAGCTGCTCAGCCGCCTCTACGACAATGAGAATGAAGCCACCCATGTCGTCGACCAAGAAGACCACGTCACGATCTGGAGCGACAGCGATGCAGAAACCGACATTGAGCGCCTCCTGGCACGCATCCTGACCGAAGCGATCACGAAAAAGGCGTCGAACATCAAGTTCACGCCGCTCCACAATGGCACGGTCGAGTTGTCCTATCGGCGCCATGGAGATCTACGCCCTTTCAAGAACATCCGCCCCCTTTCGCCAGAAGAGGCGAATGAAATGCTGCGCTTCCTCCATATCCGCACCTCTGCGCGGTACACGTCGTCTCACAAACGGGTCGAAGGTCGTCTCCTGGAACCCGCTGACGGCAACCTGGTCTTTCGCACCGGCACCTCGGAAACGTTTCTGCGCTGCGGCTTCATTCCCGCCGGAAACGATAGCTTGGCGCTGCAGCGCGAATCCGTATCGATTCGCCTGCTGGACCGAAGCGCGGTCACCATTTGTTTGCGGGATTTGAACTTGGCACCCGGAGTGATTAGGGAAATCACCATACAGCTTCAGCAGAAGCACGGGCTCATCCTGGTCGTTGGCCCCACCAGTTCCGGCAAGTCGACGACGGTGGCCGGCATGGTCACTGCCTATCGGGAAATTTACGGCAATACCCGCAACCTTCTTTCCCTGGAACAACCGATCGAACGGTTGCTCGAAGGCATCACCCAAGTGCAGGTGTCCCAGAACCGCTTTGAAGCTTACATGGCGGCTTTCTTGCGCCACGACCCCAATTTCATCTGGGTCGGTGAAATCCGCGACCGGCCGAGCGCGTCGACCTGCGTCCGCTCATCCAATACCGGACAGATTGTGGTGTCCACCCTTCACTCGGACGACGCCCCTCAGGCACCCAATGCGCTGTTGGCCTATATCAGCAACAATCTCGGCAGCAGTGCCGACTCCGTCATCGTGACGCCTTACGATGCCATCAACGCCCTCTCGCTCATCATCGCCCAACGCCTGGTTCCCGAGCTTTGCCCGCGTTGCAAGATTCCTTTTCTTGAGCATGAGCCGAATCAGGCCAATGAACAGCTGGATCGCTACAGACATTACTGCAAACGCAACGACATCGCGGAGCAAGACGTCCGCCAGTCCTTCCTGCGCAAACCTGAGGGCTGCGCCCATTGCGATCACGAAGGCTACGTGGGTGAGCGGCCGATCAATGAAATCCTGCCGATCACGAAGCAGCTTCGCCAAAAGCTGACTGCGCTTGTCAATGCCGGCCAGTTCGACAACGAGCTGCTGGCCCAAGCCCGGACCTACACCCTGCACGACGATGCGATGCGCTACGTCGCCGCCGGCGTCGTTTCGCTTGCCGATGCTCTCATCTGA
PROTEIN sequence
Length: 645
MKTIRPAALAPEIQVLFTEWAVPTTEYTSRLFTYANTMLQIPNDHRIGDMVVAFGLATREEVELHAKTKPGNMLMLEHLSERIENIRVNAQKLLAANDHLAYYDFVPAGSIHPALHENEPLRKFCIARNCLPLIGYPSNCLRVLFADYAALKEYRESPRLNRMTDPLGTLCASERLSLQIVYGIAERNQLLSRLYDNENEATHVVDQEDHVTIWSDSDAETDIERLLARILTEAITKKASNIKFTPLHNGTVELSYRRHGDLRPFKNIRPLSPEEANEMLRFLHIRTSARYTSSHKRVEGRLLEPADGNLVFRTGTSETFLRCGFIPAGNDSLALQRESVSIRLLDRSAVTICLRDLNLAPGVIREITIQLQQKHGLILVVGPTSSGKSTTVAGMVTAYREIYGNTRNLLSLEQPIERLLEGITQVQVSQNRFEAYMAAFLRHDPNFIWVGEIRDRPSASTCVRSSNTGQIVVSTLHSDDAPQAPNALLAYISNNLGSSADSVIVTPYDAINALSLIIAQRLVPELCPRCKIPFLEHEPNQANEQLDRYRHYCKRNDIAEQDVRQSFLRKPEGCAHCDHEGYVGERPINEILPITKQLRQKLTALVNAGQFDNELLAQARTYTLHDDAMRYVAAGVVSLADALI*