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scnpilot_p_inoc_scaffold_4683_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2992..3585)

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 197.0
  • Bit_score: 344
  • Evalue 7.60e-92
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SRT4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 196.0
  • Bit_score: 183
  • Evalue 2.70e-43
cheD; chemotaxis protein CheD similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 199.0
  • Bit_score: 178
  • Evalue 1.50e-42

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGCGTCTCCCGGTCCTCCCGCCGTTATTTCGATCCACGTTTCCAGGCGACGATCATCACCGTCGCGCCGGGCGAGCACGAGATCACCTCCGCCAAGGACGAGATCGTCGCGACGGTGCTCGGCTCCTGCGTCTCGGTCTGCATGCGCGACCCCATCGCCGGCGTCGGCGGGCTCAACCATTTCCTGCTTCCGAAGAACAACGGCAATGCCGATCCCAGCGCCGGCGAGCGCTATGGCGACACCGCCATGGAAGTGCTGATCAACGACCTGCTCAAGCGCGGCGCCAAGCGCAGCAATTTCGAGGCGAAGGTCTTCGGCGGGGCGCGCGTGCTCTCGGGCGCCACGATGCTCGCGATCGGCGACGGCAACATCACCTTCGTCAACGAGTTCCTGAAGGTCGAGGGCATCCCGGTGGTCTCGCGGGATGTCGGCGGCACGCGCTCGCGGCGCATCCACTACCAGCCCTCCACGGGCCGGGCCTGGGTGCAGCATGTCCAGCCGACCGCGCGCGACAGCGGCCACGAGCAGGAAATCGCCTATCTCAACCGGCTCAAGACGCAGCCGGTGGCCGGTGAAGTGGAGGTCTGGTGA
PROTEIN sequence
Length: 198
MSVSRSSRRYFDPRFQATIITVAPGEHEITSAKDEIVATVLGSCVSVCMRDPIAGVGGLNHFLLPKNNGNADPSAGERYGDTAMEVLINDLLKRGAKRSNFEAKVFGGARVLSGATMLAIGDGNITFVNEFLKVEGIPVVSRDVGGTRSRRIHYQPSTGRAWVQHVQPTARDSGHEQEIAYLNRLKTQPVAGEVEVW*