ggKbase home page

scnpilot_p_inoc_scaffold_6359_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 5650..6429

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC48_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 261.0
  • Bit_score: 331
  • Evalue 1.10e-87
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 261.0
  • Bit_score: 331
  • Evalue 3.00e-88
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA26430.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 261.0
  • Bit_score: 331
  • Evalue 1.50e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 780
ATGAAGCGAAGACTAATTCTTTCGTTCCTGGCCCTCTTGGTGATCGCCGCCTGCGGCCTGGGCATCGCCGTCGCGCGCCCGCAGTGGATGCCCTCGTGGGCTCGCGTGAACCCCGAGCGGCTCCCGGCCTGGGCCCGCTTCGGGGAGAAAGCCCCGGCCGCCGAGGACGCGGGCCTCTTCTGCAAAGAGCACGGTGTCCCCGAGAAGTTCTGCACGATCTGCCACGAGGAGCTCAAAGCAAAGCTCATGCTCTGCAAGGAGCACGGGAACATCCCCGAGGACATCTGCACGCTCTGCCACCCCGAGGTCGAGAAGAAACACTCGATCGAGATGTGCCCCAAGGGCCACGGGCTCCCCAAGCACTTCTGCATGAAGTGCGGCACGGGTCCCTCGGCTTCGCTCGATGAGCCGGACGACGGGTGGTGCGCGGTGCACGGAAAGCCCGAGGTCCTCTGCAAGGAGTGTCTTGAGGCGAAGGCTCAAGGGAAGAGTCTCCCGACCGAGAAGACGGCGACCGCGAAGGTGTGTCGTGAACCGCTGCCCACCGTGCGCCTCGCCTCCCAAGTGCTCGCCCACAAGCTTGGGATACAGACGGCCGAGGTTACCGAGGAGACCCACGCCCACCAACTCATCGCAAACGCCGAGACGGCGTACGACGCCAACCACTACGCGGACATCACGCCCAGGGTCGCGGGCTTCATCCGCGAGGTGAAGGTGGACCTCGGCCAGGCCGTCAAGCAGGGCGATGTCCTCTGCGTCATCGACTCAGCCGAGGTCTCG
PROTEIN sequence
Length: 260
MKRRLILSFLALLVIAACGLGIAVARPQWMPSWARVNPERLPAWARFGEKAPAAEDAGLFCKEHGVPEKFCTICHEELKAKLMLCKEHGNIPEDICTLCHPEVEKKHSIEMCPKGHGLPKHFCMKCGTGPSASLDEPDDGWCAVHGKPEVLCKECLEAKAQGKSLPTEKTATAKVCREPLPTVRLASQVLAHKLGIQTAEVTEETHAHQLIANAETAYDANHYADITPRVAGFIREVKVDLGQAVKQGDVLCVIDSAEVS