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scnpilot_p_inoc_scaffold_5558_8

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 6330..6989

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM12_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 219.0
  • Bit_score: 410
  • Evalue 1.20e-111
  • rbh
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:EYR77407.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 219.0
  • Bit_score: 410
  • Evalue 1.60e-111
polar amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 219.0
  • Bit_score: 312
  • Evalue 7.20e-83

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCAGGGTCTCGATTTCAGCATCGTTTCCGAATACTGGCCGCTGATCGGCAAGGGCCTCTGGTGGACCGTCGTCATCTCCACTGCCTCCGCCGTGCTCAGCGTCGTCGCTGGTATCGGCTTTGCCCTTCTCGTGCTCTATGCCACGCCCATGCTGCGCTATCCGGTGCGCCTCTTCATGTGGCTTTTCATGGGCACGCCGCTGCTGCTGCAGCTTTTTCTCATCTATTTCGGCCTCGTGCAGGTCGGCATCGACATTCCGGCCATCTGGTCGGGCATCATCGCTCTCAGCCTGCATTTCGCCGTCTACAATGCCGACATCTTTCGTGCTGGCATTGCTTCGCTCGACAAGGGGCAGACGGAGGCGGCGCGCTCACTCGGGTTTGGCACCTGGCGCACGCGGATCTACATCGTCGTGCCCCAGGCGGTGCGCAACACGGTGCCGGCCGTCGGCAACATGATGATCGCGCTGTTGAAGGAATCCTCGATCGTCTCGATGATCGGCATCGCCGAACTGGTGCATAGCGCCCAGCTTGTCATCAGCGAGACGTACCGTCCCTTCGAGTTCTACCTGACGGCGGCCGTCCTTTACTACATTGTCAATCTTGTCCTCGAAGCCGTTCTGCGCGGGATCGAACGGAAAGTGGAGCTTTCGCGATGA
PROTEIN sequence
Length: 220
MQGLDFSIVSEYWPLIGKGLWWTVVISTASAVLSVVAGIGFALLVLYATPMLRYPVRLFMWLFMGTPLLLQLFLIYFGLVQVGIDIPAIWSGIIALSLHFAVYNADIFRAGIASLDKGQTEAARSLGFGTWRTRIYIVVPQAVRNTVPAVGNMMIALLKESSIVSMIGIAELVHSAQLVISETYRPFEFYLTAAVLYYIVNLVLEAVLRGIERKVELSR*