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scnpilot_p_inoc_scaffold_6742_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2491..3294)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035D9B25 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 267.0
  • Bit_score: 500
  • Evalue 1.40e-138
  • rbh
Rcorf90 {ECO:0000313|EMBL:CDN95704.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 267.0
  • Bit_score: 484
  • Evalue 8.30e-134
trbJ-1; conjugal transfer protein TrbJ 1 similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 255.0
  • Bit_score: 405
  • Evalue 1.30e-110

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGCTTGACCATATCCTATCGCTCAGAAGCAAATCCGCGACCGCTGTCGTGGCAGCTTTTACAGTCTGCGCTTCGGCACCAGCATTTGCCGGCTCAGCGACGGGCGCTGCGACCGAGTGGACACAGCTTGCCAACAATGCACAGCTCGTCGACCTCCTTAAAAGCTCCGGCCTGCAAGTCGACAATCAGCTGACACAGATCAGTCAGTTGGCCGAGCAGATCCAAAACCAGCTGAACATCTACGAAAACATGCTGCAAAACACGGCGCAGCTGCCCGATCACATCTGGGGCCAAGTCGAAAACGACCTGAACCGGCTGCGGGATATCGTCGATCAGGGTCAGAGCATCTCCTTCTCGATGGGGAGCGCAGATGATGTGCTGAAGCAGCGTTTTCAATCCTATGCTGAGCTACAGACTGCCGCCGCCAACGGGACAGACCTGTCCTCGAGCTATGCCAGTTGGTCAGATACCAACCGCGACACCATCGCCAGCGCGCTCAAGGCTGCAAGCCTGACGGCTGACCAGTTCGACAGCGAGGAGGATACGATGGACTCCCTCCGAAACATGTCGGAATCTGCCGATGGCCAAATGAAAGCTCTCCAGGTCGGCCACGAGATTGCAGCGCAGCAGGTTGCGCAAACACAAAAGCTGCGTGGTCTCGTATCCCAGCAGATGACGATGATGGGGACGTGGCTGCAAAGCGAGCAGACCGACAAGGATCTGGCACAGGCTCGGCGGGAAAAGTTCTTCAACGCCGACACCAGTGGCGTCCCAGAAGGTCAGAAGATGGAGCCCCGCTGGTGA
PROTEIN sequence
Length: 268
MLDHILSLRSKSATAVVAAFTVCASAPAFAGSATGAATEWTQLANNAQLVDLLKSSGLQVDNQLTQISQLAEQIQNQLNIYENMLQNTAQLPDHIWGQVENDLNRLRDIVDQGQSISFSMGSADDVLKQRFQSYAELQTAAANGTDLSSSYASWSDTNRDTIASALKAASLTADQFDSEEDTMDSLRNMSESADGQMKALQVGHEIAAQQVAQTQKLRGLVSQQMTMMGTWLQSEQTDKDLAQARREKFFNADTSGVPEGQKMEPRW*