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scnpilot_p_inoc_scaffold_6497_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(800..3004)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative coupling factor TraD, PFGI-1 class n=3 Tax=Proteobacteria RepID=U8NLA2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 734.0
  • Bit_score: 1416
  • Evalue 0.0
  • rbh
Conjugative coupling factor TraD, PFGI-1 class {ECO:0000313|EMBL:EZP05434.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 734.0
  • Bit_score: 1416
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 733.0
  • Bit_score: 1384
  • Evalue 0.0

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2205
ATGTCGGGGAAACAGCCGGTCGAGGTACTGCTTCGCCCAGCGGTGGAGCTATACACCGTTGCCGCATGCGCGGGCGCCGCGTTTCTGTCCCTGGTGGCCCCATGGTCGCTCGCGCTGAGCCCGTCCATGGGCGTCGGCAGCGCGCTGGCGTTCGGCGCCTACGGCACCATCCGCTACCGCGATGCCCGCGTCATCCTGCGCTACCGGCGCAACATCCGCCGCTTGCCTCGGTACGTGATGACCAGCAAGGACGTGCCGGTCAGCCAGCAGCGCCTATTCGTGGGGCGCGGCTTCCTGTGGGAGCAGAAGCACACCCATAGATTGATGCAGACGTACCGGCCTGAATTCCGCCGCTACGTCGAGCCGACACCCGCATACCGGCTGGCGCGAAGGCTGGAGGAACGGCTGGAGTTCGCGCCGTTCCCGCTGTCCAGCCTGGCCCGGCTCACGAGCTGGGATGTGCCGCTCAACCCAGTGCGGCCGCTTCCGCCTGTGGGCGGCCTACCGCGCCTGCACGGTATCGAACCCGAGGAGGTGGACGTCAGCCTGCCACTCGGCGAGCGCGTCGGCCACTCGCTGGTGCTGGGCACCACGCGCGTCGGCAAGACCCGGCTGGCCGAACTGTTCGTGACCCAGGACATCCGGCGCGTGAACGCTGCGGGCGAGCACGAGGTGGTGATCGTGATCGACCCCAAGGGCGATGCCGATCTCCTGAAGCGGATGTACGTAGAGGCCAAGCGCGCGGGCCGCGAAGGCGAGTTTTACGTCTTTCATTTGGGCTGGCCGGACATTTCCGCGCGCTACAACGCCGTGGGCCGCTTTGGGCGCATCAGCGAGGTGGCCACCCGCGTCGCGGGGCAGCTTTCCGGCGAAGGCAACAGCGCGGCGTTCCGCGAGTTCGCCTGGCGCTTCGTCAACATCATTGCGCGCGCGTTGGTGGAGCTGGGGCAGCGCCCGGACTACATGCTGATCCAGCGGCACGTCATCAACATCGACGCGCTGTTCATCGAGTACGCCCAGCATTACTTCGCCAAGACCGAGCCCAAGGCCTGGGAGGTGATCGTCCAGATCGAGGCCAAGATCAACGAGAAGAACATCCCGCGCAACATGATCGGGCGCGAGAAGCGCGTGGTGGCGCTGGAGCAGTACCTCTCGCAGGCGCGCAACTACGACCCGGTGCTGGATGGCCTGCGCACGGCGGTTCGCTACGACAAGACGTACTTCGACAAGATCGTCGCATCGCTGCTGCCGCTGCTGGAGAAGCTCACCAGCGGCAAGATCGCCCAGCTCCTGGCTCCGAACTACTCCGACCTGGCCGACCCGCGCCCGATCTTCGACTGGATGCAGATCATCCGTAAGAGGGCCATCGTCTATGTGGGCCTGGATGCGCTCTCCGACGCCGAGGTCGCCGCAGCGGTCGGCAACTCGATTTTCAGCGATCTCGTGTCGGTCGCCGGGCATATCTACAAGCATGGGATCGACGATGGCCTGCCAAACACTTCGATGTCGGCATCGGCCAGTGCGCGCGTGCCGATCAATGTCCACGCCGACGAGTTCAACGAGTTGATGGGAGACGAGTTCATCCCGCTGATCAACAAGGGCGGCGGTGCCGGCCTGCAAGTCACTGCGTACACGCAGACCCTCTCGGACATCGAGGCCCGCATCGGCAACCGCGCCAAGGCCGGTCAGGTGATCGGAAATTTCAACAACCTGTTCATGCTGCGCGTGCGCGAGACCGCGACCGCCGAACTGCTGACCCGGCAATTGCCGAAGGTCGAGGTCTATACGACCACCATCGTCAGCGGCGCGACCGACAGCTCGGACATTCGCGGGGCGACGGATTTCACGTCGAACACTCAGGACCGCATCAGCATGTCCAGCGTGCCGATGATCGAGCCGTCTCACGTCGTCGGCCTGCCGAAAGGCCAGTGCTTCGCGTTGCTGCAGGGCGGCCAGCTTTGGAAAGTGCGCATGCCGCTGCCGGCGCCGGACCCGGACGAAGTGATGCCGGCAGACTTGCAGCAACTGGCCGGGTACATGCGCCAGAGCTACAGCGAAGCGACGCAGTGGTGGGAGTTCACCAGTTCCCCCGCCTTGCAGGACACGGGCCTGCCCGACGACCTGCTGGATGACGCCGCTGCGGCCGAACCTCCCGCGGTGGCCATTGCCACCGACGAGGACACCGGCAACAAGGCCTCGCCATGA
PROTEIN sequence
Length: 735
MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPSMGVGSALAFGAYGTIRYRDARVILRYRRNIRRLPRYVMTSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYVEPTPAYRLARRLEERLEFAPFPLSSLARLTSWDVPLNPVRPLPPVGGLPRLHGIEPEEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRVNAAGEHEVVIVIDPKGDADLLKRMYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKINEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRTAVRYDKTYFDKIVASLLPLLEKLTSGKIAQLLAPNYSDLADPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSIFSDLVSVAGHIYKHGIDDGLPNTSMSASASARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQCFALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGYMRQSYSEATQWWEFTSSPALQDTGLPDDLLDDAAAAEPPAVAIATDEDTGNKASP*