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scnpilot_p_inoc_scaffold_6966_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..290

Top 3 Functional Annotations

Value Algorithm Source
Integrase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HP89_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 95.0
  • Bit_score: 168
  • Evalue 3.40e-39
Integrase {ECO:0000313|EMBL:KFL32590.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 94.0
  • Bit_score: 184
  • Evalue 8.30e-44
integrase similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 95.0
  • Bit_score: 164
  • Evalue 1.80e-38

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
TCGCGCACAGATCCGATCTCGTCACGGCAATTGCATCGCGCGGTGCAGGAAGCGGCCGAGGTTGCCGGCATCCGCAAGAAGATCAGCCCGCATACCTTGCGGCACAGCTTTGCCACGCACCTTTTGGAGCAGGATGTCGACATCCGGGTCATCCAGGTGCTGCTCGGGCACTCCAAGCTTGAGACCACTGCGCTCTACACCAAGGTCTCGACCCGCACGATCCAGGCGGTCGCCAGTCCCCTCGACCGGCTGATGGCCCTGATGGAGGACAAGCCTCCACCCGCCTGA
PROTEIN sequence
Length: 96
SRTDPISSRQLHRAVQEAAEVAGIRKKISPHTLRHSFATHLLEQDVDIRVIQVLLGHSKLETTALYTKVSTRTIQAVASPLDRLMALMEDKPPPA*