ggKbase home page

scnpilot_p_inoc_scaffold_8559_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(800..1987)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFA0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 395.0
  • Bit_score: 690
  • Evalue 1.10e-195
  • rbh
ABC transporter, substrate binding protein {ECO:0000313|EMBL:EYR81266.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 395.0
  • Bit_score: 690
  • Evalue 1.50e-195
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 395.0
  • Bit_score: 599
  • Evalue 5.30e-169
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGCCGGACAGCTTTACAGCCAGCCGCCGGGGCCTTTGCCTTGCGGCCGCATTAATCTGTTGTGCGACACCGGCCGCGGCCGAGATCGCCATACCGATGATCTATCTGCGGCAGGAGGTGGAGCCGCCGCCGGTGCTCTCCAATCTCGATCCTATCCCCGAGGACCGGGGTATCGCGGGCGCCGAGGTGGCGCTTGCGGATACCAAAACGACCGGCAGCTTCATGGGGCATGTCTACAGCCTCGATCTCCTCTCCGTCGAACCGGGTGGCGATTTCCTCGCCGGTGCGCGCAAGGCGCTGGACACGTCGAAAATCCTGTTCCTCGATGCAACCCCGGAGGGCATGCTTGCTGTTGCCGACCTGCCGGAGGCAAAGGGTGCGCTGCTCTTCAACGTCTCTTCCGGTGAGAGGCGGCTGCGCGATGCCGATTGCCGCGCCAACATGCTGCACGCCATGGCGGAAGATGCCATGCGCACCGATGCGCTGATGCAGGTGCTGAAGGCACGGCGCTGGACACGTACCGCGCTGGTCGTCGGCCCGAAGCAGGAGGATCGCACCTTCGCCGAGACGCTGCGCGCTTCCGCACAAAAATTCGGCGTGGAAATCCTCGCCTCGAAGGACTGGACATTCGATACGGACCTTCGCCGTGCCGCCGGCCAGGAAATTCCGCTCTTCACCCAGGACTTGCCGGACCACGACGTGCTTCTGATCGCCGACGAGGCCGATGATTTCGCCCGCTACGTTGCGGACAACACCTGGCTGCCGCGTCCCGTCGCAGGTTCGGACGGCCTTCGTGGCGAAGGCTGGGCGCCGGTGCTCGAACAATGGGCCGCCGTGCAGTTGCAGAACCGGTTCGAAAAGGCGGCGGGCCGCGAGATGGGCTCGCGCGACTATGCTGCCTGGACGGCGCTGCGCACCATCGGCGAGGCGGTGACGCGCACCAATTCGGCCGATCCGGCGGGACTGCGCGCTTTCGTCCTCTCGGACAAGTTCGCGCTCGACGGCTTCAAGGGGCGCAGCCTCACCTATCGCGGCTGGAACGGCCAGCTCCGCCAGCCGATGGCGGTCGTCAACGCGCGTGCGCTGGTCGAGCTGACGCCGCTCGACGGCTACCTGCACCAGACCAACGAAATGGACACGCTGGGCCTCGATCGGCTCGAAAGCGCCTGCACTGCCTTTGGAGGATGA
PROTEIN sequence
Length: 396
MPDSFTASRRGLCLAAALICCATPAAAEIAIPMIYLRQEVEPPPVLSNLDPIPEDRGIAGAEVALADTKTTGSFMGHVYSLDLLSVEPGGDFLAGARKALDTSKILFLDATPEGMLAVADLPEAKGALLFNVSSGERRLRDADCRANMLHAMAEDAMRTDALMQVLKARRWTRTALVVGPKQEDRTFAETLRASAQKFGVEILASKDWTFDTDLRRAAGQEIPLFTQDLPDHDVLLIADEADDFARYVADNTWLPRPVAGSDGLRGEGWAPVLEQWAAVQLQNRFEKAAGREMGSRDYAAWTALRTIGEAVTRTNSADPAGLRAFVLSDKFALDGFKGRSLTYRGWNGQLRQPMAVVNARALVELTPLDGYLHQTNEMDTLGLDRLESACTAFGG*