ggKbase home page

scnpilot_p_inoc_scaffold_8591_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 4088..4327

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ03_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 79.0
  • Bit_score: 117
  • Evalue 7.40e-24
Uncharacterized protein {ECO:0000313|EMBL:EYR77567.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 79.0
  • Bit_score: 119
  • Evalue 2.70e-24
Rv0623 family protein transcription factor similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 79.0
  • Bit_score: 118
  • Evalue 1.20e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGCCGCTCTATATCAAAGACCCCGAGGTGGATAAGCTCACCGAGGAACTTATCGGCCTCACCAAATCCAGCAAGGTCGAGGCTGTCAAACTAGCGCTCAAGCACGAGATCGACAACCGCAAGACCAAACTGCATGTTCGCGATCGTCTTGCAAAGACCCTCGCCATGGCCCGCGAGGCCGGCCCAATGGTTCACCTTGATCACAAAAAGGTCACGGACGAACTGTGGGGGGAGGACTGA
PROTEIN sequence
Length: 80
MPLYIKDPEVDKLTEELIGLTKSSKVEAVKLALKHEIDNRKTKLHVRDRLAKTLAMAREAGPMVHLDHKKVTDELWGED*