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scnpilot_p_inoc_scaffold_8671_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3022..3861

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 273.0
  • Bit_score: 336
  • Evalue 3.60e-89
short-chain dehydrogenase/reductase sdr similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 273.0
  • Bit_score: 336
  • Evalue 1.00e-89
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16733.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 273.0
  • Bit_score: 336
  • Evalue 2.90e-89

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGACTAGCGAGTTCGGCAATCTAGCGGGACGTACGGCTCTAATCACTGGCGGTGGGCGTGGAATCGGGCAGGCGATTGCACTCAAGCTAGGTAGGGCAGGAGCCAAAGTGCTTGTCAACGATTTCGACGCGGAGCCTGCCAAAGCAACAGTCGAAATCATTCGGGAGAGCGGCGGCGAGGCTGACGTCTTCATCGGCGACGTTCGTGAGGACAACTTCGGCGACCGATTCATTCAGCATGCCGTTGCGACGTGTCGCTCTGTTGACATCATCATCAACAACGCGGGATACACGCGAGACGCCGTCATTCAAAAAATGTCAGATGCCGAGTGGCGGGAAATCCTTGATGTTCACCTGACAGCACCTTTCCGCATCTTGCGTGCTGCTCAACCTGTTTTCAAGCAGCAAGCCGCTGCGGATGCGGGCGCGGGACGACGCTTAGTGCGAAAGGTCGTAAATGTTTCCTCGATTTCGGGTTTGTTCGGTATCGCGGGTCAATCGAACTACTCCTCGGCCAAGGCTGGTCTGATTGGGTTGACGCAGGTGCTCGCAAAGGAGTGGGGGCGCTACGGTGTGACGGTCAACTGTGTAGCCTTCGGGTTAATTGGCACTCGGCTGGGGACAATCAAGTCGTCCACTACGAGGGTGCGTATTGGCGGAGAAGACGTGAGCGTCGGGATGAACTCTGACCTGCACAAAGACCTGCAGTCACGGATTCCACTTGGCAGAGTGGGTACCGTTGAGGAAGCAGCAGGAGCAGTCTATCTTTTCTGCACTCCAGAATCGGACTATATTAGTGGGCAGACAGTACTGTGCAGTGGCGGTCTTACGTCGATTTAG
PROTEIN sequence
Length: 280
MTSEFGNLAGRTALITGGGRGIGQAIALKLGRAGAKVLVNDFDAEPAKATVEIIRESGGEADVFIGDVREDNFGDRFIQHAVATCRSVDIIINNAGYTRDAVIQKMSDAEWREILDVHLTAPFRILRAAQPVFKQQAAADAGAGRRLVRKVVNVSSISGLFGIAGQSNYSSAKAGLIGLTQVLAKEWGRYGVTVNCVAFGLIGTRLGTIKSSTTRVRIGGEDVSVGMNSDLHKDLQSRIPLGRVGTVEEAAGAVYLFCTPESDYISGQTVLCSGGLTSI*