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scnpilot_p_inoc_scaffold_7956_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..945)

Top 3 Functional Annotations

Value Algorithm Source
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Variovorax sp. CF313 RepID=J2K3L6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 286.0
  • Bit_score: 403
  • Evalue 2.70e-109
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EJL67853.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 286.0
  • Bit_score: 403
  • Evalue 3.80e-109
putative poly-beta-1,6-N-acetyl-D-glucosamine export porin PgaA similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 321.0
  • Bit_score: 191
  • Evalue 4.50e-46

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
TTGGGTGGGCGTCCGTCGGCGCTGGCCTGCGCCTTGTCTCGTCACCTCGAACATGCATCACGAGGTTTTCCACCGATCGTTTGCGCGCTGGCCCTGGGTGCTTCATCCGCGGCCTTCGCGAATCCACCCGTCGCGGCCGTCGAACCCGCGTCGAACCCATCGGCAGCCTATGACGCGCAGCAGCACGACGCATTGATCGTCGCGCGTCGGGCGAACCGCATCGGTGCCGCGCAGGCATTGCAGCAGTTGAAGGGCTGGCTCGCCGCGCCGCTCGGCGACGCCGAACGACGGCGCGTGGTGTCCGATGCCGTTGCTATCGCAGCAGCCGACAGCCAGTTCGCCGAAGCCGTCGCGATCGCCCGCCAGGTTCCGCTCGCCGCGCTGAACGACTACGCCCTGGGCCCTCTCGCGCTGGCCGCGCGCCGCACGCACGACCTGGCGCTGCAGGGCGAAGTCATCGCCCTCTGGCGCGCCCGGCAGCCGGACGCGCGCGAACCGCGCATCCACGAAGCCTTCTGGCGGCTCGACAGCGGCGACATCGCCGGCGCAAAAGCCGTCTACGACACGCTCGCTCGGCAACCGACCCGGCAGGTCGAAGACCGCGTCGCCTTGCTCGAACTGCGCGGCGCCGTGGCTCGCGCCGAGAAGCAGCCGCTGCAGGCGCTCGCCGCCTACACCGAGGCCGGCGCGCTGCGGCCCGACCGCCGCGACCTGCGCCGCGAAACCGACTTCCTGCTCGCGGACAGCGGCGCCGCGTCGACCGCCTTCGACGACGCCGAAACCGCGGAGCGCGCCCACCCCGGCAGCTTTTCGCCGCTGGCCTTGTCCACGCTGCAACAGCAGGCGCTGGCACAGCGGCTGCACTGGGCCATCCAGGAACGCGATCAGCGCCTGGGCGCGGCGCGCGTGACGGCACTCGACCGCGTGTTGTCCGACCAGGAAGCC
PROTEIN sequence
Length: 315
LGGRPSALACALSRHLEHASRGFPPIVCALALGASSAAFANPPVAAVEPASNPSAAYDAQQHDALIVARRANRIGAAQALQQLKGWLAAPLGDAERRRVVSDAVAIAAADSQFAEAVAIARQVPLAALNDYALGPLALAARRTHDLALQGEVIALWRARQPDAREPRIHEAFWRLDSGDIAGAKAVYDTLARQPTRQVEDRVALLELRGAVARAEKQPLQALAAYTEAGALRPDRRDLRRETDFLLADSGAASTAFDDAETAERAHPGSFSPLALSTLQQQALAQRLHWAIQERDQRLGAARVTALDRVLSDQEA