ggKbase home page

scnpilot_p_inoc_scaffold_7873_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 819..1388

Top 3 Functional Annotations

Value Algorithm Source
Putative lipoprotein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E07_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 189.0
  • Bit_score: 189
  • Evalue 3.70e-45
lipoprotein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 189.0
  • Bit_score: 189
  • Evalue 1.00e-45
Putative lipoprotein {ECO:0000313|EMBL:BAB51113.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 189.0
  • Bit_score: 189
  • Evalue 5.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGACATCTCGTAGCCTCGCATTCGCCCTGGCACTCTCCGCTGGTGCAGCAATTTCGTTGCCGGCAGTTTCAATTGCGGTCGAAAAGCCCGTCGCTTCCGAGAAGAACCCACCCGGCGACATTCCCGACACCCAGGTCTTCGTCGACTATCAGGGAGCCGGGGTGACCATGAAAGTCCCGGAGGGCTGGGCCCGTGCTGACGAGGCCAATGGCGCGATCTTTTCCGACAAATACAATCGCGTCGAGCTGACGACGCAGACGACCGCGTCGTCCCCCTCGGTGTCGTCCGTGACCAGTCACGAGGCCAAAGATCTCGTCGCCGGCGGGCGGGCCGTGAAGATCATCGCCGTGAAGGAGGTCAAGCTCGACGGAGGTAGGGCAGTACGCGTCGACTATTCGGCCAATTCGGAGCCTAACGCCGTGACGAGCAAGCAGATCCGGCTCGAAGAGGTTCGCTTTTACCTGCGGGGCCCGAGCGGCAAGCTGGCCGTGCTCGATATGTCGGCGCCGAACGGGGCGGACAACGTCGACCAGTGGAACCTGATGTCCAACTCCCTGCGGGTGCAATGA
PROTEIN sequence
Length: 190
MTSRSLAFALALSAGAAISLPAVSIAVEKPVASEKNPPGDIPDTQVFVDYQGAGVTMKVPEGWARADEANGAIFSDKYNRVELTTQTTASSPSVSSVTSHEAKDLVAGGRAVKIIAVKEVKLDGGRAVRVDYSANSEPNAVTSKQIRLEEVRFYLRGPSGKLAVLDMSAPNGADNVDQWNLMSNSLRVQ*