ggKbase home page

scnpilot_p_inoc_scaffold_7874_8

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 4633..5565

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD2 components (Relaxase) n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UBN3_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 311.0
  • Bit_score: 552
  • Evalue 3.50e-154
Type IV secretory pathway, VirD2 components (relaxase) similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 311.0
  • Bit_score: 550
  • Evalue 2.90e-154
Type IV secretory pathway, VirD2 components (Relaxase) {ECO:0000313|EMBL:AGH83629.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia. similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 311.0
  • Bit_score: 550
  • Evalue 1.40e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
GTGACCAATCAAGACGACGACCGTTTCCAGGTGCAGCCTGGTGCGCCGAAACAGCGCGGCGACGCTTTCATCAACAAGGTACTGCGGCAGGCCAACAATGCTGGCGCCAAGCTCGGCAGGACGGTCGGCAAAGCCGGCTATCGGCCTGGTTCCCGGCTGGGGCGCGGCCACGTCGCGGCCTGCTTCGCCGGGGCCTCGCTCGCGCCGAACGCCCGGCGCGTGACGATCAAGGCACGGCTGGTCAATCTGTCCAAGGCCGGGCCGCGTTCGACCGTCGTGCACCTGCGCTACCTCGAACGCGAAGGGGTGGATAGCCAAGGCGGGCCGGGCCATGCCTATGGCTCGACAACCGACGCGGCGGACACCGCCGCTTTCGATGAACGCGGGCGCGAGGATCGGCACCAGTTCCGCTTCATCGTCTCGCCGGAAGACGCCGAACAGCTCGACGACCTGCGCACCTACGCCCGGCACCTGATGGCGCGCATGGAAGCCGACCTGGGCACGCGGCTGGACTGGGTAGCGGTGGACCACTGGAACACCGACAACCCGCACACGCACGTCGTCTTGCGCGGGAAGGACGACGTAGGCAAAGACCTCATCATTTCCCGCGACTACATCGCCGAGGGGATGCGTCGGCGGGCGTCAGAGCTGGCGACAGAATGGCTGGGGCCGCGTACCGAGCTGGAGATCCAGTGTGCCATGCAGCGCGAAGTCGATCAGGAGCGGTGGACGGGATTGGACCGCACCTTGCAGCGCTTGGCCGTAGATGGTTTTGTGCGTTCGGAGAAGCTGGCCGAGCCGCGGCTACAACGCCAGCGGCAAATGCTGATCGGCCGCCTGCAGCATTTGCAGCGCATGGGCCTGGCGAGCGTGCAGCAGCCTGGGACATGGACTATCCACCCAGACGCCGAACCCACACTACGGACCATGGGC
PROTEIN sequence
Length: 311
VTNQDDDRFQVQPGAPKQRGDAFINKVLRQANNAGAKLGRTVGKAGYRPGSRLGRGHVAACFAGASLAPNARRVTIKARLVNLSKAGPRSTVVHLRYLEREGVDSQGGPGHAYGSTTDAADTAAFDERGREDRHQFRFIVSPEDAEQLDDLRTYARHLMARMEADLGTRLDWVAVDHWNTDNPHTHVVLRGKDDVGKDLIISRDYIAEGMRRRASELATEWLGPRTELEIQCAMQREVDQERWTGLDRTLQRLAVDGFVRSEKLAEPRLQRQRQMLIGRLQHLQRMGLASVQQPGTWTIHPDAEPTLRTMG