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scnpilot_p_inoc_scaffold_9008_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3781..5055)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF56_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 424.0
  • Bit_score: 747
  • Evalue 6.00e-213
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KKB84613.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 424.0
  • Bit_score: 841
  • Evalue 5.60e-241
conjugal transfer protein TrbE similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 424.0
  • Bit_score: 747
  • Evalue 1.70e-213

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
GGCAATTGGTACGCCAATATCCGCGAGCCGCTGATCAACACCCGCAATCTGGCCGACCTGATCCCGGTCAATTCGGTATGGTCGGGCAGTGCCACAGCACCATGCCCGTTCTATCCGACCGGATCACCGCCGCTGATGCAGGTTGCCAGCGGTTCCAGTCCCTTCCGGCTGAACCTGCATGTCGACGATGTTGGCCACACGCTGATCTTCGGACCAACCGGATCGGGCAAGTCGACCTTGCTGGCGCTGATCGCTGCCCAGTTCTGCCGCTATGCCGGTGCGCAAATCTTCGCCTTTGACAAGGGCAAGTCGCTATTGCCGCTGACCCTCGGCGCCGGCGGCGATCATTATGAGATCGGGGCGGGGGAGGGCGGTGCAGCACTGGCCTTCTGCCCACTGTCCGAACTCGACACCGACGGCGACCGCGCTTGGGCCGCCGAGTGGATCGAAACTCTCGTCGCCATGCAGGGCGTCAGCATGACGCCGGATCATCGTAATGCCATTTCGCGGCAGCTTGGCCTCATGGCCTCGGCTCCTGGCCGATCGCTGTCGGACTTTGTCAGCGGGGTGCAGCTGCGCGACATCAAGGATGCCCTGCACCACTATACGGTCGACGGACCGATGGGCCAGCTGCTCGACGCCGAAGAAGATGGCCTGACCCTTGGCGCGTTTCAGTGCTTTGAGGTCGAAGAGCTCATGAATATGGGCGAGCGCAATCTCGTGCCAGTGCTGCTCTATCTGTTTCGGCGGATCGAAAAGCGCCTCACCGGGGCACCGAGCCTGATCATCCTCGATGAGGCCTGGCTGATGTTGGGTCATCCGACCTTCCGCGACAAGATCCGGGAATGGCTGAAAGTGCTGCGCAAAGCCAATTGTGCGGTGCTGCTCGCCACCCAGTCGATTTCCGATGCCGAACGCTCCGGTATCATCGACGTGCTGAAAGAAAGCTGCCCGACCAAGATCTGTCTGCCGAATGGCGCGGCGCGCGAGCCGGGCACGCGCGAGTTCTACGAGCGGATCGGCTTTAATGAACGCCAGATCGAGATCGTGGCCACGGCCACACCCAAGCGCGAATACTACGTCGCCTCGCCCGAAGGCCGGCGGCTGTTCGACATGGCGCTCGGACCTGTGGCGCTCGCCTTTGTCGGCGCCTCCGGCAGGGACGACCTCAAACGCATCCAGCAACTCACCCAGCAGTATGGCGCCGATTGGCCGGCGGCTTGGCTGACGGAAAGGGGGATCGGCAATGCCGAAACTATTCTCGCCCGCACCTAA
PROTEIN sequence
Length: 425
GNWYANIREPLINTRNLADLIPVNSVWSGSATAPCPFYPTGSPPLMQVASGSSPFRLNLHVDDVGHTLIFGPTGSGKSTLLALIAAQFCRYAGAQIFAFDKGKSLLPLTLGAGGDHYEIGAGEGGAALAFCPLSELDTDGDRAWAAEWIETLVAMQGVSMTPDHRNAISRQLGLMASAPGRSLSDFVSGVQLRDIKDALHHYTVDGPMGQLLDAEEDGLTLGAFQCFEVEELMNMGERNLVPVLLYLFRRIEKRLTGAPSLIILDEAWLMLGHPTFRDKIREWLKVLRKANCAVLLATQSISDAERSGIIDVLKESCPTKICLPNGAAREPGTREFYERIGFNERQIEIVATATPKREYYVASPEGRRLFDMALGPVALAFVGASGRDDLKRIQQLTQQYGADWPAAWLTERGIGNAETILART*