ggKbase home page

scnpilot_p_inoc_scaffold_10539_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..508)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003676BB9 similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 169.0
  • Bit_score: 302
  • Evalue 2.60e-79
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 165.0
  • Bit_score: 287
  • Evalue 1.60e-74
sigma-24 (FecI) similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 167.0
  • Bit_score: 274
  • Evalue 1.70e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGCTTATGATCAGCCGCTTCCTGTTCGGCCCTTTCCGCCCCGGCATCGAGGCGCAACGCCCGGTGCTCTACCGGATTGCCTATGCCTGGTGTCACGACACGGCGCTGGCCGACGACCTGGTGCAGGAAACCCTGTCCAAGGCCTGGACACGACGTGCCCAGTTGCGCGATGAGGCGGCCTTGAAGGCCTGGATGGTGTCGATCATGAATCACTGCTGGCTCGACCATCTGCGCCGCCGGCGCGACTTCGAGGACGTCGAGGACTGGCAGGACGAGCTCGAGTCCAGTGCCGATACCCCGGAGGCTAGCTGCAACCGGGAGCAGGTGATCGCCTCGGTACGGTCGGCGGTGGCATGCCTGCCCATGGGGCAACGCCAGGTGCTGACGCTGGTGGACCTGGAGGAATTCGGCTATGCCGAGGTGGCTGACATTCTGGATATACCGGTCGGTACCGTGATGAGTCGTCTGTCGCGCGCGCGCGCAAACCTGAAAAACTTGCTGGTTACA
PROTEIN sequence
Length: 169
MLMISRFLFGPFRPGIEAQRPVLYRIAYAWCHDTALADDLVQETLSKAWTRRAQLRDEAALKAWMVSIMNHCWLDHLRRRRDFEDVEDWQDELESSADTPEASCNREQVIASVRSAVACLPMGQRQVLTLVDLEEFGYAEVADILDIPVGTVMSRLSRARANLKNLLVT