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scnpilot_p_inoc_scaffold_9295_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 4520..4936

Top 3 Functional Annotations

Value Algorithm Source
RpiR family transcriptional regulator n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KA41_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 124.0
  • Bit_score: 179
  • Evalue 2.80e-42
RpiR family transcriptional regulator {ECO:0000313|EMBL:EMG52045.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactru similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 124.0
  • Bit_score: 179
  • Evalue 3.90e-42
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 129.0
  • Bit_score: 176
  • Evalue 6.60e-42

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Taxonomy

Ochrobactrum sp. CDB2 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCAGCCACATGTTTCCGCCTTTGTCGGCGGCACGGGCAATATCCTCGAGGTCGCGCGCGCGATGCGCGGCGATCTCAGGAAATCCGACCGCAAGGTCTGCGATACGATCCTCGCCGATCCCCGCCGCATCCTCTCGGCGACCGTCGCCGAGACGGCGCAGCTCGCCGATGTCAGCCAGCCGACGGTCATCCGCTTCTGCAACGCCGTCGGCTGCGACGGCTTCCAGGATTTCAAGCTGCGCCTCGCTCAGGCGCTGGCGCTCGGCGTGCCGGCGACCCATTCGGTCATCACCGACGCCGACAGCCCGGACGCCGTCGCCCGCAAGATCTTCGACTACACGATGACGAGCCTCGACTGGGCGCGGAACCGGCTCAATTCGGCGGCGCTGTCGCGCGCGGTCGACGTCTTGCTCGCG
PROTEIN sequence
Length: 139
MQPHVSAFVGGTGNILEVARAMRGDLRKSDRKVCDTILADPRRILSATVAETAQLADVSQPTVIRFCNAVGCDGFQDFKLRLAQALALGVPATHSVITDADSPDAVARKIFDYTMTSLDWARNRLNSAALSRAVDVLLA