ggKbase home page

scnpilot_p_inoc_scaffold_10883_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2776..3087)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8K7J2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 91.0
  • Bit_score: 91
  • Evalue 4.40e-16
helix-turn-helix family protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 92.0
  • Bit_score: 95
  • Evalue 1.10e-17
Transcriptional regulator, PbsX family {ECO:0000313|EMBL:CDY78038.1}; Uncharacterized protein {ECO:0000313|EMBL:KDR39852.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 86.0
  • Bit_score: 95
  • Evalue 5.50e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia glathei → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGAAGCTCATTCAAATGCGTTTAACAATATCGCCATGGCTCTGCGGGTAATCCGTCGCGCACGCGGGTACACCCAAGAGGACTTCTCCTCTGTTTCAAGTCGAACCTACATCAGCAGTCTAGAGCGAGGCACCAAAAGTCCCACGTTGGGAAAAGTGGAGCAGATCGCCACCGCTTTGAACGTCCATCCCCTGACCCTGCTAGCAATTTCATTTGCCACTTCTCCATCGCTAGATGACGTCTCGGTTGTTTTGGCTGAAGTCCAGAAAGAAGTCGCTGCGCTTGATCTGCCTAGCGGGGGCGGTGGCTGA
PROTEIN sequence
Length: 104
MEAHSNAFNNIAMALRVIRRARGYTQEDFSSVSSRTYISSLERGTKSPTLGKVEQIATALNVHPLTLLAISFATSPSLDDVSVVLAEVQKEVAALDLPSGGGG*