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scnpilot_p_inoc_scaffold_9534_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1122

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 373.0
  • Bit_score: 743
  • Evalue 1.10e-211
DNA-directed RNA polymerase subunit beta n=2 Tax=Microbacterium RepID=H8E543_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 373.0
  • Bit_score: 740
  • Evalue 6.40e-211
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 373.0
  • Bit_score: 717
  • Evalue 1.60e-204

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
GTCGGCAAGGTCACGCCCAAGGGTGAGACCGAGCTGAGCGCCGAGGAGCGCCTGCTGCGCGCGATCTTCAACGAGAAGAGCCGCGAAGTCCGTGACACCTCGCTGAAGGTGCCCCACGGCGAGCAGGGCACGATCATCGCCGTCAAGGAGTTCAACGCCGAGGACGGCGACGACGAGCTGGGCTCGGGCGTCAACCGCCGCGTCGTGGTCTACATCGCCCAGAAGCGCAAGATCACCGAGGGCGACAAGCTCGCCGGCCGCCACGGCAACAAGGGCGTCATCGCGAAGATCCTGCCCGTCGAGGACATGCCGTTCCTCGCGGACGGCACGCCGGTCGACGTCGTGCTCAACCCGCTCGGCATCCCGGGTCGAATGAACTTCGGCCAGGTGCTGGAGACCCACCTCGGGTGGATCGCCAAGCAGGGCTGGAAGGTCGAGGGCACGCCGGAGTGGGCCGTGCACCTGCCGGAGGAGGCCCGCGAGGCCGCTCCCGGCACGAAGGTCGCGACTCCGGTGTTCGACGGTGCGCACGAGGCGGAGATCGCGGGCCTGCTCGACTCGACGCTGCCCAACCGCGACGGCGAGCGTCTCATCGACAGCTCGGGCAAGACGACGCTGTTCGACGGTCGCTCCGGCGAGCCGTTCCCGGCGCCCATCTCGGTCGGCTACATGTACATCCTGAAGCTGCACCACCTCGTGGACGACAAGATCCACGCGCGTTCGACGGGCCCGTACTCGATGATCACCCAGCAGCCGCTCGGTGGTAAGGCGCAGTTCGGCGGTCAGCGTTTCGGTGAGATGGAGGTGTGGGCCCTCGAGGCCTACGGCGCCGCATACGCGCTCCAGGAGCTCCTGACGATCAAGTCCGACGACATCGTCGGCCGCGTGAAGGTCTACGAGGCCATCGTCAAGGGCGAGAACATCCAGGAGCCGGGCATCCCCGAGTCGTTCAAGGTGCTCATGAAGGAGATGCAGTCGCTCTGCCTGAACGTCGAGGTCCTCTCGGCCGACGGCACGCCCGTCAACCTCCGAGACACGGATGACGAGGCCTTCCGCGCAGCGGAGGAGCTCGGCATCAACATCTCCAGCCGCTTCGAGTCCTCGTCGATCGACGAGATCTGA
PROTEIN sequence
Length: 374
VGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIAVKEFNAEDGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVIAKILPVEDMPFLADGTPVDVVLNPLGIPGRMNFGQVLETHLGWIAKQGWKVEGTPEWAVHLPEEAREAAPGTKVATPVFDGAHEAEIAGLLDSTLPNRDGERLIDSSGKTTLFDGRSGEPFPAPISVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDIVGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTPVNLRDTDDEAFRAAEELGINISSRFESSSIDEI*