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scnpilot_p_inoc_scaffold_12161_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2110..2979

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C5038 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 289.0
  • Bit_score: 530
  • Evalue 7.80e-148
  • rbh
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27920.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 260.0
  • Bit_score: 205
  • Evalue 8.10e-50
ribonuclease bn similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 275.0
  • Bit_score: 204
  • Evalue 4.70e-50

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGCGTTATCTGCGGGTTCCCATCCGCGCCGGCCGGAGCTGGGCGGCGCACCGCCTGACGACGCATGGCGCAGCCCTGGCCTATTACGCCGTCTTCGCGCTGTCGCCCATCCTCGTCATCGCCGTGTCGATCTCGGGCCTGTTTTTTGGCCGGGATGCCGTCGAGGGACGGATCGTGGTCCAGATGGAAGGCTTGCTGGGCCACGCCGGAGCCAGTCTGGTGCAGAGATTGCTGGAAGCGAGCTATCTGTCCGGCCAGGGCGGCATCGCGGTGCTGCTTGGTCTCGCCGGCATGCTGATGGGTGCCACGGGTCTGTTCGTTGAAATGAGCGTCGCCTTCGAACGGATCTTCGACGCGAAGCGCGAGTACCGTCACGTCATGGCGGTACTGCTGATGGATCGCCTGCGCGGCCTGGCCATCATCATCGGCGTCGGCTTTCTGCTCATCGTCTCGCTGCTGGCGAGTACCGCGACCATTGCATTGGGTAGCTATCTGACCCGCGGCTTCGGTACTTGGTTAAGACTGGCCGGTGTGTTCCAGGCCCTGGTCTCGCTGGCCTCCATGACTGCCCTGGTGCTACTGCTCTACCGCCTGCTCATACCGGTGCGGATGCCGCGCCGCATTTTGCTGACGGGCGCCGCGATATCCGCAGTGCTGTTCGAGGTGGGCAAATGGGGAATCGGGCTGTATCTGGGGCGTGGCGCGATCATGAGCACGTTCGGGGCGGCCGGTTCGCTGGCGGTGATCCTGCTGTGGGTCTATTACGTTTCGCTGATCATGCTCTACGGGGCTGAGATCACCCACCAGTTGTATCGCCTGCATCGGATCCACCAGCGGGCGGCAGGAGGTGCGGCTCGCGTCAGCCGTTGA
PROTEIN sequence
Length: 290
MRYLRVPIRAGRSWAAHRLTTHGAALAYYAVFALSPILVIAVSISGLFFGRDAVEGRIVVQMEGLLGHAGASLVQRLLEASYLSGQGGIAVLLGLAGMLMGATGLFVEMSVAFERIFDAKREYRHVMAVLLMDRLRGLAIIIGVGFLLIVSLLASTATIALGSYLTRGFGTWLRLAGVFQALVSLASMTALVLLLYRLLIPVRMPRRILLTGAAISAVLFEVGKWGIGLYLGRGAIMSTFGAAGSLAVILLWVYYVSLIMLYGAEITHQLYRLHRIHQRAAGGAARVSR*