ggKbase home page

scnpilot_p_inoc_scaffold_13452_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1237..1884

Top 3 Functional Annotations

Value Algorithm Source
Phage repressor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 215.0
  • Bit_score: 304
  • Evalue 8.90e-80
  • rbh
DNA-binding protein {ECO:0000313|EMBL:KKB08152.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 215.0
  • Bit_score: 397
  • Evalue 1.40e-107
phage repressor similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 215.0
  • Bit_score: 304
  • Evalue 2.50e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGTTGTCACATAGGGCCATTTGGGACGGCATCGACGCCATGGCGCGTCGGCACGGCCATTCGGTTTCGGCGTTAGCGCGGCTGGCTGGCCTCGACGCTACGGCGTTCAACGTGTCCAAACGCGTCAGCAAGGACGGTCGGGAGCGCTGGCCGTCCACCGAAAGCATCGCCAAGATTTTGGAAGCGACCGGGGAAGGTTTTGACACCTTTCTGTCCGGCACCGGCGCCTATATGCAAACCTCGGGCTTTGCCGAGCCGGCGCAGCGGACGGTGCCGCTTTTGGGGCTTGCCCAGGCCGGGGCCGGTGGTTTCTTCGACAGCGCCGGTTTTCCGGTCGGTCAGGGCTGGGACGAAATCGTGCTGCCGACGCCGGCGGATAATGGCATCTATGCGCTTGAGGTAACCGGCGACAGCATGGAGCCGCTCTATCGTGAGGGCGATCGCATCGTTGTCTCCCCCACCGAGCAGGTGCGCCGCGGCGACCGTGTGGTGGTCAGAACGCGAGAGGGTGAAGTGATGGCGAAAATCCTCCACCGCCAGACCGCCCGGCAGATGGAATTGCATTCGATCAATCCCGCCTATGAACCGCGTGTGCTCGATCTGGCCGATGTGGAATGGGTGGCGCGCATCATCTGGGCCAGCCAGTGA
PROTEIN sequence
Length: 216
MLSHRAIWDGIDAMARRHGHSVSALARLAGLDATAFNVSKRVSKDGRERWPSTESIAKILEATGEGFDTFLSGTGAYMQTSGFAEPAQRTVPLLGLAQAGAGGFFDSAGFPVGQGWDEIVLPTPADNGIYALEVTGDSMEPLYREGDRIVVSPTEQVRRGDRVVVRTREGEVMAKILHRQTARQMELHSINPAYEPRVLDLADVEWVARIIWASQ*