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scnpilot_p_inoc_scaffold_13480_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 534..1151

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein J n=3 Tax=Pseudomonas aeruginosa RepID=U9LWV1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 213.0
  • Bit_score: 191
  • Evalue 8.00e-46
General secretion pathway protein GspJ {ECO:0000313|EMBL:EZQ20231.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 224.0
  • Bit_score: 201
  • Evalue 8.30e-49
HxcW putative pseudopilin similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 213.0
  • Bit_score: 191
  • Evalue 2.30e-46

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGCAAGCCACCCGAGAGCAGCAGCGCGGCTTCACGCTGATCGAAGTGATGATCGCCATCGCGCTCATGGCCGTGTTGAGCGTGATGGCTTGGCGCGGCCTCGACAGCGTGACGCGCGCCAACGCCATGCTCGAACAGCGCACCGACAACGTCGCGCGGCTCATGCGCGCGCTCGACCAACTGGAGCGCGACGTGGCCCTGCGCGCCACCACCGAACTGCCGCCGTCCAAGGCCGCCGGGTTGCTGCCCGCCGCGATGACGGCGCGGCGCCAGGCGGACCTTCCGTTTTTCGTGGAAATCGTGCGCGCCGCACCCGCCGCGCCGGGCTATTGGCAGCGCGTGCAATGGTGGCAGCGCGGCGGCGTGCTTTACCGGGCGGCGGGGCCGGCGGCGGCGTCGTTCCCGTTGCCGCCGCCCGACGAGCAGGCGCGCGTGGTGGTGCTGGAGGATGTGTCGGCGTTCCAGTTGCGTGCGTGGGAGCCGGGGCAGGGCTGGCGCAACCTGCCGGCCGTGGCACCGGCGCGCGCCAACGCGACCGGACTCGAGCTGGCGCTGGGCATGCGGGCCGAAGGGGAGAGCGGGGCGCAGAGCTTCCGGCGGGTTTTCTCGCTCGACTGA
PROTEIN sequence
Length: 206
MQATREQQRGFTLIEVMIAIALMAVLSVMAWRGLDSVTRANAMLEQRTDNVARLMRALDQLERDVALRATTELPPSKAAGLLPAAMTARRQADLPFFVEIVRAAPAAPGYWQRVQWWQRGGVLYRAAGPAAASFPLPPPDEQARVVVLEDVSAFQLRAWEPGQGWRNLPAVAPARANATGLELALGMRAEGESGAQSFRRVFSLD*