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scnpilot_p_inoc_scaffold_13514_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(734..997)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Burkholderia sp. H160 RepID=B5WDM4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 65.0
  • Bit_score: 65
  • Evalue 2.80e-08
Helix-turn-helix domain protein {ECO:0000313|EMBL:KDB08399.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholde similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 67.0
  • Bit_score: 66
  • Evalue 3.00e-08
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 78.0
  • Bit_score: 64
  • Evalue 1.30e-08

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGAAATTGGCAGTGGTGGAGACTTCGCAAGACAGCTTTTGTCATGGAATCTCAAAAAGCATCGGGCAAAGCTAGGTCTGTCTCAGGAAGACCTGGGCACTCGCTGCGGGTTTCACCGCACCTACGTCAGTCGTATTGAGCGGCTTGAGACGGGCCCTACCATCGACAATGTGCATCGCCTGGCCGTCGGACTTGGGACGACGATCGGGGAACTGTTCAACGAACGCGAATTCCACAGCGCGGGCGAACCGTCCAGTCACTGA
PROTEIN sequence
Length: 88
MEIGSGGDFARQLLSWNLKKHRAKLGLSQEDLGTRCGFHRTYVSRIERLETGPTIDNVHRLAVGLGTTIGELFNEREFHSAGEPSSH*