ggKbase home page

scnpilot_p_inoc_scaffold_13994_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 622..1065

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRB9_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 147.0
  • Bit_score: 190
  • Evalue 9.80e-46
single-strand binding protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 147.0
  • Bit_score: 190
  • Evalue 2.80e-46
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=293826 species="Bacteria; Firmicutes; Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 147.0
  • Bit_score: 190
  • Evalue 1.40e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alkaliphilus metalliredigens → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 444
ATGAATAATGTTGTTTTAATCGGACGTTTGGCAAGAGACCCAGAACTCAGATTTGTTCCCGGCAGCGGGATGGCAGTAGCCAACTTTACGATGGCGATCGATAAAGGATTGACACGTGAGAAAAAGCAGGAATTTGAAAGCCAAGGCAAACCGACAGCAGATTTCATAAGAATCGTTGTTTGGGGAAAACAGGCTGAAAACTGCTCACAATATTTAGCAAAAGGCAAACTCGTGGCTATACAAGGTTCTATTCAAACCAGCAGCTATAAGTCGAATACAGGAGAGGTCAGATACACGACCGAAGTACTTGCCAACCGAGTCGAATTCCTCGAATGGGGAGAAAAGTCACAGTCATCAACGTCAAAAGGCGATGATTTCAGCTTTGGTGCTGGAAGCTTTGAAGATTTTCAATCCATTGAAGATGATGATGATGTTCCATTCTAG
PROTEIN sequence
Length: 148
MNNVVLIGRLARDPELRFVPGSGMAVANFTMAIDKGLTREKKQEFESQGKPTADFIRIVVWGKQAENCSQYLAKGKLVAIQGSIQTSSYKSNTGEVRYTTEVLANRVEFLEWGEKSQSSTSKGDDFSFGAGSFEDFQSIEDDDDVPF*